Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEM52774.1 | SEN26196.1 | SAMN04488003_101427 | SAMN04488003_11233 | Hypothetical protein. | Thiamine-phosphate pyrophosphorylase. | 0.586 |
SEM52774.1 | SEN40805.1 | SAMN04488003_101427 | SAMN04488003_11563 | Hypothetical protein. | Hypothetical protein. | 0.526 |
SEM52774.1 | cpoB | SAMN04488003_101427 | SAMN04488003_11464 | Hypothetical protein. | Tol-pal system protein YbgF; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family. | 0.495 |
SEM92794.1 | SEN26196.1 | SAMN04488003_106155 | SAMN04488003_11233 | Phosphate ABC transporter substrate-binding protein, PhoT family. | Thiamine-phosphate pyrophosphorylase. | 0.477 |
SEN03197.1 | SEN26196.1 | SAMN04488003_10840 | SAMN04488003_11233 | Molybdopterin or thiamine biosynthesis adenylyltransferase. | Thiamine-phosphate pyrophosphorylase. | 0.722 |
SEN03197.1 | SEN70048.1 | SAMN04488003_10840 | SAMN04488003_12711 | Molybdopterin or thiamine biosynthesis adenylyltransferase. | Hydroxymethylpyrimidine kinase. | 0.866 |
SEN26196.1 | SEM52774.1 | SAMN04488003_11233 | SAMN04488003_101427 | Thiamine-phosphate pyrophosphorylase. | Hypothetical protein. | 0.586 |
SEN26196.1 | SEM92794.1 | SAMN04488003_11233 | SAMN04488003_106155 | Thiamine-phosphate pyrophosphorylase. | Phosphate ABC transporter substrate-binding protein, PhoT family. | 0.477 |
SEN26196.1 | SEN03197.1 | SAMN04488003_11233 | SAMN04488003_10840 | Thiamine-phosphate pyrophosphorylase. | Molybdopterin or thiamine biosynthesis adenylyltransferase. | 0.722 |
SEN26196.1 | SEN26233.1 | SAMN04488003_11233 | SAMN04488003_11234 | Thiamine-phosphate pyrophosphorylase. | tRNA/rRNA methyltransferase. | 0.716 |
SEN26196.1 | SEN40805.1 | SAMN04488003_11233 | SAMN04488003_11563 | Thiamine-phosphate pyrophosphorylase. | Hypothetical protein. | 0.494 |
SEN26196.1 | SEN70048.1 | SAMN04488003_11233 | SAMN04488003_12711 | Thiamine-phosphate pyrophosphorylase. | Hydroxymethylpyrimidine kinase. | 0.983 |
SEN26196.1 | cpoB | SAMN04488003_11233 | SAMN04488003_11464 | Thiamine-phosphate pyrophosphorylase. | Tol-pal system protein YbgF; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family. | 0.493 |
SEN26196.1 | lysS | SAMN04488003_11233 | SAMN04488003_103164 | Thiamine-phosphate pyrophosphorylase. | lysyl-tRNA synthetase, class I; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.578 |
SEN26196.1 | rsgA | SAMN04488003_11233 | SAMN04488003_10468 | Thiamine-phosphate pyrophosphorylase. | Ribosome biogenesis GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.837 |
SEN26196.1 | thiM | SAMN04488003_11233 | SAMN04488003_1279 | Thiamine-phosphate pyrophosphorylase. | Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family. | 0.989 |
SEN26233.1 | SEN26196.1 | SAMN04488003_11234 | SAMN04488003_11233 | tRNA/rRNA methyltransferase. | Thiamine-phosphate pyrophosphorylase. | 0.716 |
SEN40805.1 | SEM52774.1 | SAMN04488003_11563 | SAMN04488003_101427 | Hypothetical protein. | Hypothetical protein. | 0.526 |
SEN40805.1 | SEN26196.1 | SAMN04488003_11563 | SAMN04488003_11233 | Hypothetical protein. | Thiamine-phosphate pyrophosphorylase. | 0.494 |
SEN40805.1 | cpoB | SAMN04488003_11563 | SAMN04488003_11464 | Hypothetical protein. | Tol-pal system protein YbgF; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family. | 0.487 |
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