Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEM95760.1 | SEN37869.1 | SAMN04488003_10723 | SAMN04488003_11473 | Two-component system, chemotaxis family, CheB/CheR fusion protein. | Hypothetical protein. | 0.635 |
SEM95760.1 | ftsA | SAMN04488003_10723 | SAMN04488003_101443 | Two-component system, chemotaxis family, CheB/CheR fusion protein. | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | 0.560 |
SEM95760.1 | ruvB | SAMN04488003_10723 | SAMN04488003_11472 | Two-component system, chemotaxis family, CheB/CheR fusion protein. | Holliday junction DNA helicase subunit RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.813 |
SEN37869.1 | SEM95760.1 | SAMN04488003_11473 | SAMN04488003_10723 | Hypothetical protein. | Two-component system, chemotaxis family, CheB/CheR fusion protein. | 0.635 |
SEN37869.1 | SEN74746.1 | SAMN04488003_11473 | SAMN04488003_1328 | Hypothetical protein. | YggT family protein. | 0.635 |
SEN37869.1 | atpA | SAMN04488003_11473 | SAMN04488003_10887 | Hypothetical protein. | ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.646 |
SEN37869.1 | ftsA | SAMN04488003_11473 | SAMN04488003_101443 | Hypothetical protein. | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | 0.988 |
SEN37869.1 | murG | SAMN04488003_11473 | SAMN04488003_101449 | Hypothetical protein. | UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.665 |
SEN37869.1 | pheT | SAMN04488003_11473 | SAMN04488003_107158 | Hypothetical protein. | phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.617 |
SEN37869.1 | rpoC | SAMN04488003_11473 | SAMN04488003_1346 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.603 |
SEN37869.1 | ruvA | SAMN04488003_11473 | SAMN04488003_11474 | Hypothetical protein. | Holliday junction DNA helicase subunit RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.784 |
SEN37869.1 | ruvB | SAMN04488003_11473 | SAMN04488003_11472 | Hypothetical protein. | Holliday junction DNA helicase subunit RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.814 |
SEN37869.1 | ruvC | SAMN04488003_11473 | SAMN04488003_11475 | Hypothetical protein. | Holliday junction endonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.814 |
SEN74746.1 | SEN37869.1 | SAMN04488003_1328 | SAMN04488003_11473 | YggT family protein. | Hypothetical protein. | 0.635 |
SEN74746.1 | ftsA | SAMN04488003_1328 | SAMN04488003_101443 | YggT family protein. | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | 0.529 |
atpA | SEN37869.1 | SAMN04488003_10887 | SAMN04488003_11473 | ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | Hypothetical protein. | 0.646 |
atpA | pheT | SAMN04488003_10887 | SAMN04488003_107158 | ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.521 |
atpA | rpoC | SAMN04488003_10887 | SAMN04488003_1346 | ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.893 |
ftsA | SEM95760.1 | SAMN04488003_101443 | SAMN04488003_10723 | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | Two-component system, chemotaxis family, CheB/CheR fusion protein. | 0.560 |
ftsA | SEN37869.1 | SAMN04488003_101443 | SAMN04488003_11473 | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | Hypothetical protein. | 0.988 |
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