Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEN44797.1 | SEN44870.1 | SAMN04488003_1171 | SAMN04488003_1173 | Short chain dehydrogenase. | Cupin domain-containing protein. | 0.796 |
SEN44797.1 | SEN44896.1 | SAMN04488003_1171 | SAMN04488003_1174 | Short chain dehydrogenase. | TRAP transporter, DctM subunit. | 0.731 |
SEN44797.1 | SEN44929.1 | SAMN04488003_1171 | SAMN04488003_1175 | Short chain dehydrogenase. | TRAP-type C4-dicarboxylate transport system, small permease component. | 0.777 |
SEN44797.1 | SEN44964.1 | SAMN04488003_1171 | SAMN04488003_1176 | Short chain dehydrogenase. | Tripartite ATP-independent transporter solute receptor, DctP family. | 0.543 |
SEN44797.1 | kduI | SAMN04488003_1171 | SAMN04488003_1172 | Short chain dehydrogenase. | 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. | 0.819 |
SEN44797.1 | uxaC | SAMN04488003_1171 | SAMN04488003_1177 | Short chain dehydrogenase. | Glucuronate isomerase. | 0.553 |
SEN44870.1 | SEN44797.1 | SAMN04488003_1173 | SAMN04488003_1171 | Cupin domain-containing protein. | Short chain dehydrogenase. | 0.796 |
SEN44870.1 | SEN44896.1 | SAMN04488003_1173 | SAMN04488003_1174 | Cupin domain-containing protein. | TRAP transporter, DctM subunit. | 0.762 |
SEN44870.1 | SEN44929.1 | SAMN04488003_1173 | SAMN04488003_1175 | Cupin domain-containing protein. | TRAP-type C4-dicarboxylate transport system, small permease component. | 0.905 |
SEN44870.1 | SEN44964.1 | SAMN04488003_1173 | SAMN04488003_1176 | Cupin domain-containing protein. | Tripartite ATP-independent transporter solute receptor, DctP family. | 0.568 |
SEN44870.1 | SEN45033.1 | SAMN04488003_1173 | SAMN04488003_1178 | Cupin domain-containing protein. | Transcriptional regulator, GntR family. | 0.567 |
SEN44870.1 | kduI | SAMN04488003_1173 | SAMN04488003_1172 | Cupin domain-containing protein. | 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. | 0.852 |
SEN44870.1 | uxaC | SAMN04488003_1173 | SAMN04488003_1177 | Cupin domain-containing protein. | Glucuronate isomerase. | 0.723 |
SEN44896.1 | SEN44797.1 | SAMN04488003_1174 | SAMN04488003_1171 | TRAP transporter, DctM subunit. | Short chain dehydrogenase. | 0.731 |
SEN44896.1 | SEN44870.1 | SAMN04488003_1174 | SAMN04488003_1173 | TRAP transporter, DctM subunit. | Cupin domain-containing protein. | 0.762 |
SEN44896.1 | SEN44929.1 | SAMN04488003_1174 | SAMN04488003_1175 | TRAP transporter, DctM subunit. | TRAP-type C4-dicarboxylate transport system, small permease component. | 0.964 |
SEN44896.1 | SEN44964.1 | SAMN04488003_1174 | SAMN04488003_1176 | TRAP transporter, DctM subunit. | Tripartite ATP-independent transporter solute receptor, DctP family. | 0.992 |
SEN44896.1 | kduI | SAMN04488003_1174 | SAMN04488003_1172 | TRAP transporter, DctM subunit. | 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. | 0.727 |
SEN44896.1 | uxaC | SAMN04488003_1174 | SAMN04488003_1177 | TRAP transporter, DctM subunit. | Glucuronate isomerase. | 0.599 |
SEN44929.1 | SEN44797.1 | SAMN04488003_1175 | SAMN04488003_1171 | TRAP-type C4-dicarboxylate transport system, small permease component. | Short chain dehydrogenase. | 0.777 |
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