STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN52518.1Glycosyltransferase involved in cell wall bisynthesis. (384 aa)    
Predicted Functional Partners:
SEN52561.1
Glycosyltransferase, GT2 family.
 
    0.956
SEN52597.1
Hypothetical protein.
 
     0.955
SEN52633.1
Sucrose-phosphate synthase.
 
  
 0.940
SEN52687.1
Sulfotransferase family protein.
 
 
   0.886
SEN52483.1
cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.
       0.783
SEM46172.1
Alpha-N-acetylglucosamine transferase.
   
 0.725
SEN49242.1
Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
 
 0.716
SEN17981.1
Maltooligosyl trehalose hydrolase.
  
  0.700
SEN52756.1
Glycosyltransferase like family 2.
  
  
  0.657
SEN52843.1
N-acetylglucosaminyl deacetylase, LmbE family.
  
 
  0.626
Your Current Organism:
Loktanella fryxellensis
NCBI taxonomy Id: 245187
Other names: CIP 108323, DSM 16213, JCM 21635, L. fryxellensis, LMG 22007, LMG:22007, Loktanella fryxellensis Van Trappen et al. 2004, NBRC 102485
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