STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN56726.1Phage DNA packaging protein, Nu1 subunit of terminase. (166 aa)    
Predicted Functional Partners:
SEN56756.1
Phage terminase, large subunit GpA.
 
    0.953
SEN56894.1
Phage prohead protease, HK97 family.
 
    0.771
SEN56834.1
Phage portal protein, lambda family.
 
    0.744
SEN56925.1
Hypothetical protein.
  
     0.704
SEN56863.1
Predicted phage recombinase, RecA/RadA family.
 
    0.618
SEN56666.1
Helix-turn-helix domain-containing protein.
       0.542
SEN56695.1
Hypothetical protein.
       0.541
SEN56961.1
Integrase; Belongs to the 'phage' integrase family.
  
     0.457
SEN21219.1
Putative DNA primase/helicase.
       0.416
SEN56640.1
DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain.
       0.412
Your Current Organism:
Loktanella fryxellensis
NCBI taxonomy Id: 245187
Other names: CIP 108323, DSM 16213, JCM 21635, L. fryxellensis, LMG 22007, LMG:22007, Loktanella fryxellensis Van Trappen et al. 2004, NBRC 102485
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