STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN75897.1Hypothetical protein. (210 aa)    
Predicted Functional Partners:
SEN75872.1
Hypothetical protein.
 
     0.951
SEN64450.1
Hypothetical protein.
 
     0.792
SEN64344.1
Hypothetical protein.
 
     0.787
SEN75928.1
Hypothetical protein.
 
     0.787
SEN64317.1
Hypothetical protein.
 
     0.784
SEN75962.1
Hypothetical protein.
 
     0.784
SEN75992.1
Hypothetical protein.
 
     0.778
SEN64259.1
Hypothetical protein.
 
     0.777
SEN79788.1
Hypothetical protein.
 
     0.775
SEN64184.1
Phage tail tape measure protein, lambda family.
 
     0.772
Your Current Organism:
Loktanella fryxellensis
NCBI taxonomy Id: 245187
Other names: CIP 108323, DSM 16213, JCM 21635, L. fryxellensis, LMG 22007, LMG:22007, Loktanella fryxellensis Van Trappen et al. 2004, NBRC 102485
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