Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKB38570.1 | SKB42064.1 | SAMN05421800_101324 | SAMN05421800_101588 | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Citrate synthase; Belongs to the citrate synthase family. | 0.987 |
SKB38570.1 | SKB69688.1 | SAMN05421800_101324 | SAMN05421800_106110 | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 3-hydroxyacyl-CoA dehydrogenase. | 0.603 |
SKB38570.1 | SKB77351.1 | SAMN05421800_101324 | SAMN05421800_10864 | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.759 |
SKB38570.1 | SKB80381.1 | SAMN05421800_101324 | SAMN05421800_10947 | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Aconitase. | 0.723 |
SKB38570.1 | SKB80397.1 | SAMN05421800_101324 | SAMN05421800_10948 | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Aconitase. | 0.865 |
SKB38570.1 | SKC00238.1 | SAMN05421800_101324 | SAMN05421800_11978 | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase. | 0.415 |
SKB38570.1 | SKC01465.1 | SAMN05421800_101324 | SAMN05421800_12070 | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Allosteric NADP-dependent malic enzyme. | 0.982 |
SKB38570.1 | aceA | SAMN05421800_101324 | SAMN05421800_103133 | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Isocitrate lyase. | 0.774 |
SKB38570.1 | aceB | SAMN05421800_101324 | SAMN05421800_103132 | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Malate synthase; Belongs to the malate synthase family. | 0.946 |
SKB42064.1 | SKB38570.1 | SAMN05421800_101588 | SAMN05421800_101324 | Citrate synthase; Belongs to the citrate synthase family. | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.987 |
SKB42064.1 | SKB69688.1 | SAMN05421800_101588 | SAMN05421800_106110 | Citrate synthase; Belongs to the citrate synthase family. | 3-hydroxyacyl-CoA dehydrogenase. | 0.919 |
SKB42064.1 | SKB80381.1 | SAMN05421800_101588 | SAMN05421800_10947 | Citrate synthase; Belongs to the citrate synthase family. | Aconitase. | 0.996 |
SKB42064.1 | SKB80397.1 | SAMN05421800_101588 | SAMN05421800_10948 | Citrate synthase; Belongs to the citrate synthase family. | Aconitase. | 0.988 |
SKB42064.1 | SKC01465.1 | SAMN05421800_101588 | SAMN05421800_12070 | Citrate synthase; Belongs to the citrate synthase family. | Allosteric NADP-dependent malic enzyme. | 0.980 |
SKB42064.1 | aceA | SAMN05421800_101588 | SAMN05421800_103133 | Citrate synthase; Belongs to the citrate synthase family. | Isocitrate lyase. | 0.637 |
SKB42064.1 | aceB | SAMN05421800_101588 | SAMN05421800_103132 | Citrate synthase; Belongs to the citrate synthase family. | Malate synthase; Belongs to the malate synthase family. | 0.978 |
SKB55238.1 | aceA | SAMN05421800_103131 | SAMN05421800_103133 | Hypothetical protein. | Isocitrate lyase. | 0.734 |
SKB55238.1 | aceB | SAMN05421800_103131 | SAMN05421800_103132 | Hypothetical protein. | Malate synthase; Belongs to the malate synthase family. | 0.814 |
SKB69688.1 | SKB38570.1 | SAMN05421800_106110 | SAMN05421800_101324 | 3-hydroxyacyl-CoA dehydrogenase. | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.603 |
SKB69688.1 | SKB42064.1 | SAMN05421800_106110 | SAMN05421800_101588 | 3-hydroxyacyl-CoA dehydrogenase. | Citrate synthase; Belongs to the citrate synthase family. | 0.919 |
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