Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SKB42562.1 | SKB54504.1 | SAMN05421800_101640 | SAMN05421800_10385 | ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains). | UvrD-like helicase C-terminal domain-containing protein. | 0.593 |
| SKB42562.1 | SKB56189.1 | SAMN05421800_101640 | SAMN05421800_103216 | ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains). | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | 0.537 |
| SKB54494.1 | SKB54504.1 | SAMN05421800_10384 | SAMN05421800_10385 | Hypothetical protein. | UvrD-like helicase C-terminal domain-containing protein. | 0.556 |
| SKB54504.1 | SKB42562.1 | SAMN05421800_10385 | SAMN05421800_101640 | UvrD-like helicase C-terminal domain-containing protein. | ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains). | 0.593 |
| SKB54504.1 | SKB54494.1 | SAMN05421800_10385 | SAMN05421800_10384 | UvrD-like helicase C-terminal domain-containing protein. | Hypothetical protein. | 0.556 |
| SKB54504.1 | SKB56189.1 | SAMN05421800_10385 | SAMN05421800_103216 | UvrD-like helicase C-terminal domain-containing protein. | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | 0.467 |
| SKB54504.1 | dnaN | SAMN05421800_10385 | SAMN05421800_11793 | UvrD-like helicase C-terminal domain-containing protein. | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | 0.656 |
| SKB54504.1 | truB | SAMN05421800_10385 | SAMN05421800_105167 | UvrD-like helicase C-terminal domain-containing protein. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.471 |
| SKB56189.1 | SKB42562.1 | SAMN05421800_103216 | SAMN05421800_101640 | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains). | 0.537 |
| SKB56189.1 | SKB54504.1 | SAMN05421800_103216 | SAMN05421800_10385 | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | UvrD-like helicase C-terminal domain-containing protein. | 0.467 |
| SKB56189.1 | dnaN | SAMN05421800_103216 | SAMN05421800_11793 | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | 0.931 |
| dnaN | SKB54504.1 | SAMN05421800_11793 | SAMN05421800_10385 | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | UvrD-like helicase C-terminal domain-containing protein. | 0.656 |
| dnaN | SKB56189.1 | SAMN05421800_11793 | SAMN05421800_103216 | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | 0.931 |
| truB | SKB54504.1 | SAMN05421800_105167 | SAMN05421800_10385 | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | UvrD-like helicase C-terminal domain-containing protein. | 0.471 |