STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB61941.12-oxoglutarate dehydrogenase E1 component. (937 aa)    
Predicted Functional Partners:
SKB61554.1
2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase).
 0.999
odhB
2-oxoglutarate dehydrogenase E2 component; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).
 0.999
SKB66176.1
2-oxoisovalerate dehydrogenase E1 component.
   
 0.999
SKB77512.1
Pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component.
   
 0.999
lpdA
Dihydrolipoamide dehydrogenase.
 
 0.996
lpdA-2
Dihydrolipoamide dehydrogenase.
 
 0.996
SKB59986.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
 0.992
SKC07652.1
Serine protease Do.
    
 
 0.974
SKB38131.1
Ribose-phosphate pyrophosphokinase.
    
 0.968
sucC
succinyl-CoA synthetase beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.
 
 
 0.952
Your Current Organism:
Chryseobacterium balustinum
NCBI taxonomy Id: 246
Other names: ATCC 33487, C. balustinum, CIP 103103, DSM 16775, Flavobacterium balustinum, IFO 15053, JCM 21074, LMG 8329, LMG:8329, NBRC 15053, NCTC 11212
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.