Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKB34040.1 | SKB34046.1 | SAMN05421800_1012 | SAMN05421800_1013 | BlaR1 peptidase M56. | Predicted transcriptional regulator. | 0.985 |
SKB34040.1 | SKB60025.1 | SAMN05421800_1012 | SAMN05421800_10446 | BlaR1 peptidase M56. | Predicted transcriptional regulator. | 0.934 |
SKB34040.1 | SKC08432.1 | SAMN05421800_1012 | SAMN05421800_12828 | BlaR1 peptidase M56. | Predicted transcriptional regulator. | 0.935 |
SKB34040.1 | SKC08443.1 | SAMN05421800_1012 | SAMN05421800_12829 | BlaR1 peptidase M56. | BlaR1 peptidase M56. | 0.708 |
SKB34046.1 | SKB34040.1 | SAMN05421800_1013 | SAMN05421800_1012 | Predicted transcriptional regulator. | BlaR1 peptidase M56. | 0.985 |
SKB34046.1 | SKB39563.1 | SAMN05421800_1013 | SAMN05421800_101389 | Predicted transcriptional regulator. | Outer membrane receptor proteins, mostly Fe transport. | 0.446 |
SKB34046.1 | SKB60025.1 | SAMN05421800_1013 | SAMN05421800_10446 | Predicted transcriptional regulator. | Predicted transcriptional regulator. | 0.959 |
SKB34046.1 | SKB60097.1 | SAMN05421800_1013 | SAMN05421800_10451 | Predicted transcriptional regulator. | Cu2+-exporting ATPase. | 0.641 |
SKB34046.1 | SKB85514.1 | SAMN05421800_1013 | SAMN05421800_1111 | Predicted transcriptional regulator. | Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain. | 0.754 |
SKB34046.1 | SKC08432.1 | SAMN05421800_1013 | SAMN05421800_12828 | Predicted transcriptional regulator. | Predicted transcriptional regulator. | 0.919 |
SKB34046.1 | SKC08443.1 | SAMN05421800_1013 | SAMN05421800_12829 | Predicted transcriptional regulator. | BlaR1 peptidase M56. | 0.949 |
SKB34046.1 | SKC09682.1 | SAMN05421800_1013 | SAMN05421800_13040 | Predicted transcriptional regulator. | Hypothetical protein. | 0.778 |
SKB39563.1 | SKB34046.1 | SAMN05421800_101389 | SAMN05421800_1013 | Outer membrane receptor proteins, mostly Fe transport. | Predicted transcriptional regulator. | 0.446 |
SKB39563.1 | SKB60025.1 | SAMN05421800_101389 | SAMN05421800_10446 | Outer membrane receptor proteins, mostly Fe transport. | Predicted transcriptional regulator. | 0.446 |
SKB39563.1 | SKB60097.1 | SAMN05421800_101389 | SAMN05421800_10451 | Outer membrane receptor proteins, mostly Fe transport. | Cu2+-exporting ATPase. | 0.757 |
SKB39563.1 | SKC08432.1 | SAMN05421800_101389 | SAMN05421800_12828 | Outer membrane receptor proteins, mostly Fe transport. | Predicted transcriptional regulator. | 0.446 |
SKB60014.1 | SKB60025.1 | SAMN05421800_10445 | SAMN05421800_10446 | Hypothetical protein. | Predicted transcriptional regulator. | 0.775 |
SKB60014.1 | pdhA | SAMN05421800_10445 | SAMN05421800_10444 | Hypothetical protein. | Pyruvate dehydrogenase E1 component alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.534 |
SKB60025.1 | SKB34040.1 | SAMN05421800_10446 | SAMN05421800_1012 | Predicted transcriptional regulator. | BlaR1 peptidase M56. | 0.934 |
SKB60025.1 | SKB34046.1 | SAMN05421800_10446 | SAMN05421800_1013 | Predicted transcriptional regulator. | Predicted transcriptional regulator. | 0.959 |
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