Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKB40070.1 | SKB40494.1 | SAMN05421800_101433 | SAMN05421800_101473 | Nucleotidyl transferase. | RmlD substrate binding domain-containing protein. | 0.451 |
SKB40070.1 | SKB40793.1 | SAMN05421800_101433 | SAMN05421800_101492 | Nucleotidyl transferase. | UDPglucose 6-dehydrogenase. | 0.656 |
SKB40070.1 | SKB42681.1 | SAMN05421800_101433 | SAMN05421800_101656 | Nucleotidyl transferase. | Glucose-1-phosphate thymidylyltransferase. | 0.812 |
SKB40070.1 | SKB90155.1 | SAMN05421800_101433 | SAMN05421800_11375 | Nucleotidyl transferase. | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | 0.451 |
SKB40070.1 | SKB90167.1 | SAMN05421800_101433 | SAMN05421800_11376 | Nucleotidyl transferase. | UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing); Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | 0.406 |
SKB40070.1 | SKB90177.1 | SAMN05421800_101433 | SAMN05421800_11377 | Nucleotidyl transferase. | dTDP-4-dehydrorhamnose 3,5-epimerase. | 0.774 |
SKB40070.1 | rfbA | SAMN05421800_101433 | SAMN05421800_101490 | Nucleotidyl transferase. | Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. | 0.778 |
SKB40070.1 | rfbB | SAMN05421800_101433 | SAMN05421800_101491 | Nucleotidyl transferase. | dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.811 |
SKB40070.1 | rfbD | SAMN05421800_101433 | SAMN05421800_109143 | Nucleotidyl transferase. | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | 0.451 |
SKB40494.1 | SKB40070.1 | SAMN05421800_101473 | SAMN05421800_101433 | RmlD substrate binding domain-containing protein. | Nucleotidyl transferase. | 0.451 |
SKB40494.1 | SKB40793.1 | SAMN05421800_101473 | SAMN05421800_101492 | RmlD substrate binding domain-containing protein. | UDPglucose 6-dehydrogenase. | 0.431 |
SKB40494.1 | SKB42681.1 | SAMN05421800_101473 | SAMN05421800_101656 | RmlD substrate binding domain-containing protein. | Glucose-1-phosphate thymidylyltransferase. | 0.645 |
SKB40494.1 | SKB90177.1 | SAMN05421800_101473 | SAMN05421800_11377 | RmlD substrate binding domain-containing protein. | dTDP-4-dehydrorhamnose 3,5-epimerase. | 0.771 |
SKB40494.1 | rfbA | SAMN05421800_101473 | SAMN05421800_101490 | RmlD substrate binding domain-containing protein. | Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. | 0.696 |
SKB40494.1 | rfbB | SAMN05421800_101473 | SAMN05421800_101491 | RmlD substrate binding domain-containing protein. | dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.803 |
SKB40793.1 | SKB40070.1 | SAMN05421800_101492 | SAMN05421800_101433 | UDPglucose 6-dehydrogenase. | Nucleotidyl transferase. | 0.656 |
SKB40793.1 | SKB40494.1 | SAMN05421800_101492 | SAMN05421800_101473 | UDPglucose 6-dehydrogenase. | RmlD substrate binding domain-containing protein. | 0.431 |
SKB40793.1 | SKB42681.1 | SAMN05421800_101492 | SAMN05421800_101656 | UDPglucose 6-dehydrogenase. | Glucose-1-phosphate thymidylyltransferase. | 0.786 |
SKB40793.1 | SKB90167.1 | SAMN05421800_101492 | SAMN05421800_11376 | UDPglucose 6-dehydrogenase. | UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing); Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | 0.403 |
SKB40793.1 | SKB90177.1 | SAMN05421800_101492 | SAMN05421800_11377 | UDPglucose 6-dehydrogenase. | dTDP-4-dehydrorhamnose 3,5-epimerase. | 0.718 |
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