STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC06816.1ATP-binding cassette, subfamily B. (730 aa)    
Predicted Functional Partners:
SKB78500.1
Multidrug resistance efflux pump.
 
 0.932
SKC11919.1
Multidrug resistance efflux pump.
 
 0.932
SKC06839.1
Uncharacterized protein.
 
    0.845
SKB39829.1
ATP-binding cassette, subfamily B, MsbA.
 
 
 
0.843
SKB66580.1
ATP-binding cassette, subfamily B.
 
 
 
0.842
SKB92668.1
ATP-binding cassette, subfamily C.
 
 
 
0.840
SKC10826.1
ABC-type multidrug transport system, ATPase and permease component.
 
 
 
0.840
SKB98682.1
ABC-type multidrug transport system, ATPase and permease component.
 
 
 
0.839
SKB83496.1
ATP-binding cassette, subfamily B.
   
 
0.831
SKC06830.1
Hypothetical protein.
       0.773
Your Current Organism:
Chryseobacterium balustinum
NCBI taxonomy Id: 246
Other names: ATCC 33487, C. balustinum, CIP 103103, DSM 16775, Flavobacterium balustinum, IFO 15053, JCM 21074, LMG 8329, LMG:8329, NBRC 15053, NCTC 11212
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.