Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDK42375.1 | SDK47116.1 | SAMN05660337_0403 | SAMN05660337_0557 | PAS domain S-box-containing protein. | Glutamine synthetase. | 0.565 |
| SDK42375.1 | SDK51676.1 | SAMN05660337_0403 | SAMN05660337_0697 | PAS domain S-box-containing protein. | RNA polymerase sigma-32 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.642 |
| SDK42375.1 | SDK91401.1 | SAMN05660337_0403 | SAMN05660337_1686 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.998 |
| SDK42375.1 | SDL16216.1 | SAMN05660337_0403 | SAMN05660337_2304 | PAS domain S-box-containing protein. | MerR HTH family regulatory protein; Manually curated. | 0.953 |
| SDK42375.1 | SDL37572.1 | SAMN05660337_0403 | SAMN05660337_2822 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.999 |
| SDK42375.1 | rpoA | SAMN05660337_0403 | SAMN05660337_1397 | PAS domain S-box-containing protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.420 |
| SDK42375.1 | rpoB | SAMN05660337_0403 | SAMN05660337_1429 | PAS domain S-box-containing protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.528 |
| SDK42375.1 | rpoZ | SAMN05660337_0403 | SAMN05660337_1123 | PAS domain S-box-containing protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.551 |
| SDK47116.1 | SDK42375.1 | SAMN05660337_0557 | SAMN05660337_0403 | Glutamine synthetase. | PAS domain S-box-containing protein. | 0.565 |
| SDK47116.1 | SDK91401.1 | SAMN05660337_0557 | SAMN05660337_1686 | Glutamine synthetase. | PAS domain S-box-containing protein. | 0.509 |
| SDK47116.1 | SDL16216.1 | SAMN05660337_0557 | SAMN05660337_2304 | Glutamine synthetase. | MerR HTH family regulatory protein; Manually curated. | 0.868 |
| SDK47116.1 | SDL37572.1 | SAMN05660337_0557 | SAMN05660337_2822 | Glutamine synthetase. | Signal transduction histidine kinase. | 0.533 |
| SDK51676.1 | SDK42375.1 | SAMN05660337_0697 | SAMN05660337_0403 | RNA polymerase sigma-32 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | PAS domain S-box-containing protein. | 0.642 |
| SDK51676.1 | SDK91401.1 | SAMN05660337_0697 | SAMN05660337_1686 | RNA polymerase sigma-32 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | PAS domain S-box-containing protein. | 0.526 |
| SDK51676.1 | SDL16216.1 | SAMN05660337_0697 | SAMN05660337_2304 | RNA polymerase sigma-32 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | MerR HTH family regulatory protein; Manually curated. | 0.824 |
| SDK51676.1 | SDL37572.1 | SAMN05660337_0697 | SAMN05660337_2822 | RNA polymerase sigma-32 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Signal transduction histidine kinase. | 0.521 |
| SDK51676.1 | rpoA | SAMN05660337_0697 | SAMN05660337_1397 | RNA polymerase sigma-32 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.944 |
| SDK51676.1 | rpoB | SAMN05660337_0697 | SAMN05660337_1429 | RNA polymerase sigma-32 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.954 |
| SDK51676.1 | rpoZ | SAMN05660337_0697 | SAMN05660337_1123 | RNA polymerase sigma-32 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.941 |
| SDK91401.1 | SDK42375.1 | SAMN05660337_1686 | SAMN05660337_0403 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.998 |
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