Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDL33431.1 | SDL33460.1 | SAMN05660337_2681 | SAMN05660337_2682 | Lysine methyltransferase. | CopG family transcriptional regulator, nickel-responsive regulator; Transcriptional regulator; Belongs to the transcriptional regulatory CopG/NikR family. | 0.788 |
SDL33431.1 | SDL35415.1 | SAMN05660337_2681 | SAMN05660337_2747 | Lysine methyltransferase. | Hypothetical protein. | 0.407 |
SDL33431.1 | SDL39631.1 | SAMN05660337_2681 | SAMN05660337_2904 | Lysine methyltransferase. | Hypothetical protein. | 0.416 |
SDL33431.1 | folE2 | SAMN05660337_2681 | SAMN05660337_2683 | Lysine methyltransferase. | GTP cyclohydrolase I; Converts GTP to 7,8-dihydroneopterin triphosphate. | 0.571 |
SDL33431.1 | gcvH | SAMN05660337_2681 | SAMN05660337_2680 | Lysine methyltransferase. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.418 |
SDL33460.1 | SDL33431.1 | SAMN05660337_2682 | SAMN05660337_2681 | CopG family transcriptional regulator, nickel-responsive regulator; Transcriptional regulator; Belongs to the transcriptional regulatory CopG/NikR family. | Lysine methyltransferase. | 0.788 |
SDL33460.1 | folE2 | SAMN05660337_2682 | SAMN05660337_2683 | CopG family transcriptional regulator, nickel-responsive regulator; Transcriptional regulator; Belongs to the transcriptional regulatory CopG/NikR family. | GTP cyclohydrolase I; Converts GTP to 7,8-dihydroneopterin triphosphate. | 0.588 |
SDL33460.1 | gcvH | SAMN05660337_2682 | SAMN05660337_2680 | CopG family transcriptional regulator, nickel-responsive regulator; Transcriptional regulator; Belongs to the transcriptional regulatory CopG/NikR family. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.437 |
SDL35415.1 | SDL33431.1 | SAMN05660337_2747 | SAMN05660337_2681 | Hypothetical protein. | Lysine methyltransferase. | 0.407 |
SDL35415.1 | SDL39631.1 | SAMN05660337_2747 | SAMN05660337_2904 | Hypothetical protein. | Hypothetical protein. | 0.742 |
SDL39631.1 | SDL33431.1 | SAMN05660337_2904 | SAMN05660337_2681 | Hypothetical protein. | Lysine methyltransferase. | 0.416 |
SDL39631.1 | SDL35415.1 | SAMN05660337_2904 | SAMN05660337_2747 | Hypothetical protein. | Hypothetical protein. | 0.742 |
SDL39631.1 | gcvH | SAMN05660337_2904 | SAMN05660337_2680 | Hypothetical protein. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.691 |
folE2 | SDL33431.1 | SAMN05660337_2683 | SAMN05660337_2681 | GTP cyclohydrolase I; Converts GTP to 7,8-dihydroneopterin triphosphate. | Lysine methyltransferase. | 0.571 |
folE2 | SDL33460.1 | SAMN05660337_2683 | SAMN05660337_2682 | GTP cyclohydrolase I; Converts GTP to 7,8-dihydroneopterin triphosphate. | CopG family transcriptional regulator, nickel-responsive regulator; Transcriptional regulator; Belongs to the transcriptional regulatory CopG/NikR family. | 0.588 |
gcvH | SDL33431.1 | SAMN05660337_2680 | SAMN05660337_2681 | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Lysine methyltransferase. | 0.418 |
gcvH | SDL33460.1 | SAMN05660337_2680 | SAMN05660337_2682 | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | CopG family transcriptional regulator, nickel-responsive regulator; Transcriptional regulator; Belongs to the transcriptional regulatory CopG/NikR family. | 0.437 |
gcvH | SDL39631.1 | SAMN05660337_2680 | SAMN05660337_2904 | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Hypothetical protein. | 0.691 |