STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL52139.1Glucose ABC transporter membrane protein/mannose ABC transporter membrane protein. (372 aa)    
Predicted Functional Partners:
SDL52102.1
Glucose ABC transporter membrane protein/mannose ABC transporter membrane protein.
 
 0.999
SDL52172.1
Glucose-binding protein/mannose-binding protein.
 
 0.999
SDL52204.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-); Belongs to the ABC transporter superfamily.
 
 0.998
SDK80584.1
ABC-type glycerol-3-phosphate transport system, substrate-binding protein.
 
 0.996
SDK36958.1
Molybdate transport system ATP-binding protein.
  
 0.993
SDK36241.1
PTS system, N-acetylglucosamine-specific IIC component.
 
 
 0.926
SDL52067.1
Fructokinase.
 
  
 0.864
SDL52031.1
Hypothetical protein.
 
    0.824
SDL52269.1
Transcriptional regulator, LacI family.
 
  
 0.794
SDL07369.1
ABC-2 type transport system ATP-binding protein.
    
 0.793
Your Current Organism:
Desulfovibrio ferrireducens
NCBI taxonomy Id: 246191
Other names: D. ferrireducens, DSM 16995, Desulfovibrio ferrireducens Vandieken et al. 2006, JCM 12925, delta proteobacterium 61, strain 61
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.