STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL58004.1Response regulator receiver domain-containing protein. (127 aa)    
Predicted Functional Partners:
SDL57902.1
His Kinase A (phospho-acceptor) domain-containing protein.
 0.956
SDL57959.1
Two-component system, NtrC family, sensor kinase.
 0.947
SDK92681.1
PAS domain S-box-containing protein.
 
 0.932
SDL57856.1
Signal transduction histidine kinase.
 0.928
SDK60365.1
Signal transduction histidine kinase.
 
 0.917
SDL47812.1
Two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB.
 
 0.916
SDL51927.1
Hypothetical protein.
 
 0.907
SDK93083.1
PAS domain S-box-containing protein.
 
 0.893
SDL60682.1
Adenylate cyclase, class 3.
  
 0.882
SDL22701.1
Two-component system, NtrC family, sensor histidine kinase HydH.
 0.876
Your Current Organism:
Desulfovibrio ferrireducens
NCBI taxonomy Id: 246191
Other names: D. ferrireducens, DSM 16995, Desulfovibrio ferrireducens Vandieken et al. 2006, JCM 12925, delta proteobacterium 61, strain 61
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.