STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHY_0399Iron compound ABC transporter, ATP-binding protein; Identified by similarity to SP:P23878; match to protein family HMM PF00005. (399 aa)    
Predicted Functional Partners:
CHY_0398
Iron compound ABC transporter, permease protein; Identified by match to protein family HMM PF01032; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.996
CHY_0397
Iron compound ABC transporter, iron-binding protein; Identified by match to protein family HMM PF01497.
 
 
 0.991
CHY_2192
Iron compound ABC transporter, permease protein; Identified by match to protein family HMM PF01032; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.983
CHY_2193
Iron compound ABC transporter, iron-binding protein; Identified by match to protein family HMM PF01497.
 
 
 0.912
CHY_2279
Cobalt ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
    
0.832
CHY_0395
Hypothetical protein; Identified by Glimmer2; putative.
       0.741
CHY_0396
Hypothetical protein; Identified by Glimmer2; putative.
       0.741
CHY_0377
Anion ABC transporter, ATP-binding protein; Identified by similarity to SP:P14788; match to protein family HMM PF00005.
  
     0.591
CHY_0400
Conserved domain protein; Identified by similarity to SP:Q58002.
       0.586
CHY_2414
Iron permease, FTR1 family; Identified by match to protein family HMM PF03239.
   
  
 0.578
Your Current Organism:
Carboxydothermus hydrogenoformans
NCBI taxonomy Id: 246194
Other names: C. hydrogenoformans Z-2901, Carboxydothermus hydrogenoformans Z-2901, Carboxydothermus hydrogenoformans str. Z-2901
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.