Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CHY_0308 | CHY_0484 | CHY_0308 | CHY_0484 | Identified by match to protein family HMM TIGR01319. | Methylaspartate ammonia-lyase; Involved in the methylaspartate cycle. Catalyzes the formation of the alpha,beta-unsaturated bond by the reversible anti elimination of ammonia from L-threo-beta-methylaspartate (L-threo- (2S,3S)-3-methylaspartate) to give mesaconate. It can also catalyze the amination of fumarate and ethylfumarate, and the deamination of hydroxylamine, hydrazine, methylamine and ethylamine. | 0.801 |
| CHY_0308 | CHY_0582 | CHY_0308 | CHY_0582 | Identified by match to protein family HMM TIGR01319. | Methylaspartate ammonia-lyase; Involved in the methylaspartate cycle. Catalyzes the formation of the alpha,beta-unsaturated bond by the reversible anti elimination of ammonia from L-threo-beta-methylaspartate (L-threo- (2S,3S)-3-methylaspartate) to give mesaconate (By similarity). | 0.801 |
| CHY_0308 | CHY_0583 | CHY_0308 | CHY_0583 | Identified by match to protein family HMM TIGR01319. | Conserved hypothetical protein; Identified by similarity to PIR:H85574. | 0.436 |
| CHY_0308 | mamA | CHY_0308 | CHY_0307 | Identified by match to protein family HMM TIGR01319. | Methylaspartate mutase, S subunit; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate). | 0.959 |
| CHY_0308 | mutE | CHY_0308 | CHY_0309 | Identified by match to protein family HMM TIGR01319. | Methylaspartate mutase, E subunit; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate). | 0.953 |
| CHY_0484 | CHY_0308 | CHY_0484 | CHY_0308 | Methylaspartate ammonia-lyase; Involved in the methylaspartate cycle. Catalyzes the formation of the alpha,beta-unsaturated bond by the reversible anti elimination of ammonia from L-threo-beta-methylaspartate (L-threo- (2S,3S)-3-methylaspartate) to give mesaconate. It can also catalyze the amination of fumarate and ethylfumarate, and the deamination of hydroxylamine, hydrazine, methylamine and ethylamine. | Identified by match to protein family HMM TIGR01319. | 0.801 |
| CHY_0484 | CHY_0582 | CHY_0484 | CHY_0582 | Methylaspartate ammonia-lyase; Involved in the methylaspartate cycle. Catalyzes the formation of the alpha,beta-unsaturated bond by the reversible anti elimination of ammonia from L-threo-beta-methylaspartate (L-threo- (2S,3S)-3-methylaspartate) to give mesaconate. It can also catalyze the amination of fumarate and ethylfumarate, and the deamination of hydroxylamine, hydrazine, methylamine and ethylamine. | Methylaspartate ammonia-lyase; Involved in the methylaspartate cycle. Catalyzes the formation of the alpha,beta-unsaturated bond by the reversible anti elimination of ammonia from L-threo-beta-methylaspartate (L-threo- (2S,3S)-3-methylaspartate) to give mesaconate (By similarity). | 0.902 |
| CHY_0484 | CHY_0583 | CHY_0484 | CHY_0583 | Methylaspartate ammonia-lyase; Involved in the methylaspartate cycle. Catalyzes the formation of the alpha,beta-unsaturated bond by the reversible anti elimination of ammonia from L-threo-beta-methylaspartate (L-threo- (2S,3S)-3-methylaspartate) to give mesaconate. It can also catalyze the amination of fumarate and ethylfumarate, and the deamination of hydroxylamine, hydrazine, methylamine and ethylamine. | Conserved hypothetical protein; Identified by similarity to PIR:H85574. | 0.491 |
| CHY_0484 | hemE | CHY_0484 | CHY_0483 | Methylaspartate ammonia-lyase; Involved in the methylaspartate cycle. Catalyzes the formation of the alpha,beta-unsaturated bond by the reversible anti elimination of ammonia from L-threo-beta-methylaspartate (L-threo- (2S,3S)-3-methylaspartate) to give mesaconate. It can also catalyze the amination of fumarate and ethylfumarate, and the deamination of hydroxylamine, hydrazine, methylamine and ethylamine. | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.508 |
| CHY_0484 | hemG | CHY_0484 | CHY_0481 | Methylaspartate ammonia-lyase; Involved in the methylaspartate cycle. Catalyzes the formation of the alpha,beta-unsaturated bond by the reversible anti elimination of ammonia from L-threo-beta-methylaspartate (L-threo- (2S,3S)-3-methylaspartate) to give mesaconate. It can also catalyze the amination of fumarate and ethylfumarate, and the deamination of hydroxylamine, hydrazine, methylamine and ethylamine. | Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | 0.508 |
| CHY_0484 | hemH | CHY_0484 | CHY_0482 | Methylaspartate ammonia-lyase; Involved in the methylaspartate cycle. Catalyzes the formation of the alpha,beta-unsaturated bond by the reversible anti elimination of ammonia from L-threo-beta-methylaspartate (L-threo- (2S,3S)-3-methylaspartate) to give mesaconate. It can also catalyze the amination of fumarate and ethylfumarate, and the deamination of hydroxylamine, hydrazine, methylamine and ethylamine. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.508 |
| CHY_0484 | hisA | CHY_0484 | CHY_1089 | Methylaspartate ammonia-lyase; Involved in the methylaspartate cycle. Catalyzes the formation of the alpha,beta-unsaturated bond by the reversible anti elimination of ammonia from L-threo-beta-methylaspartate (L-threo- (2S,3S)-3-methylaspartate) to give mesaconate. It can also catalyze the amination of fumarate and ethylfumarate, and the deamination of hydroxylamine, hydrazine, methylamine and ethylamine. | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Identified by similarity to SP:O35006; match to protein family HMM PF00977; match to protein family HMM TIGR00007. | 0.693 |
| CHY_0484 | mamA | CHY_0484 | CHY_0307 | Methylaspartate ammonia-lyase; Involved in the methylaspartate cycle. Catalyzes the formation of the alpha,beta-unsaturated bond by the reversible anti elimination of ammonia from L-threo-beta-methylaspartate (L-threo- (2S,3S)-3-methylaspartate) to give mesaconate. It can also catalyze the amination of fumarate and ethylfumarate, and the deamination of hydroxylamine, hydrazine, methylamine and ethylamine. | Methylaspartate mutase, S subunit; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate). | 0.979 |
| CHY_0484 | mutE | CHY_0484 | CHY_0309 | Methylaspartate ammonia-lyase; Involved in the methylaspartate cycle. Catalyzes the formation of the alpha,beta-unsaturated bond by the reversible anti elimination of ammonia from L-threo-beta-methylaspartate (L-threo- (2S,3S)-3-methylaspartate) to give mesaconate. It can also catalyze the amination of fumarate and ethylfumarate, and the deamination of hydroxylamine, hydrazine, methylamine and ethylamine. | Methylaspartate mutase, E subunit; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate). | 0.980 |
| CHY_0484 | tpiA | CHY_0484 | CHY_0282 | Methylaspartate ammonia-lyase; Involved in the methylaspartate cycle. Catalyzes the formation of the alpha,beta-unsaturated bond by the reversible anti elimination of ammonia from L-threo-beta-methylaspartate (L-threo- (2S,3S)-3-methylaspartate) to give mesaconate. It can also catalyze the amination of fumarate and ethylfumarate, and the deamination of hydroxylamine, hydrazine, methylamine and ethylamine. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.491 |
| CHY_0582 | CHY_0308 | CHY_0582 | CHY_0308 | Methylaspartate ammonia-lyase; Involved in the methylaspartate cycle. Catalyzes the formation of the alpha,beta-unsaturated bond by the reversible anti elimination of ammonia from L-threo-beta-methylaspartate (L-threo- (2S,3S)-3-methylaspartate) to give mesaconate (By similarity). | Identified by match to protein family HMM TIGR01319. | 0.801 |
| CHY_0582 | CHY_0484 | CHY_0582 | CHY_0484 | Methylaspartate ammonia-lyase; Involved in the methylaspartate cycle. Catalyzes the formation of the alpha,beta-unsaturated bond by the reversible anti elimination of ammonia from L-threo-beta-methylaspartate (L-threo- (2S,3S)-3-methylaspartate) to give mesaconate (By similarity). | Methylaspartate ammonia-lyase; Involved in the methylaspartate cycle. Catalyzes the formation of the alpha,beta-unsaturated bond by the reversible anti elimination of ammonia from L-threo-beta-methylaspartate (L-threo- (2S,3S)-3-methylaspartate) to give mesaconate. It can also catalyze the amination of fumarate and ethylfumarate, and the deamination of hydroxylamine, hydrazine, methylamine and ethylamine. | 0.902 |
| CHY_0582 | CHY_0583 | CHY_0582 | CHY_0583 | Methylaspartate ammonia-lyase; Involved in the methylaspartate cycle. Catalyzes the formation of the alpha,beta-unsaturated bond by the reversible anti elimination of ammonia from L-threo-beta-methylaspartate (L-threo- (2S,3S)-3-methylaspartate) to give mesaconate (By similarity). | Conserved hypothetical protein; Identified by similarity to PIR:H85574. | 0.880 |
| CHY_0582 | hisA | CHY_0582 | CHY_1089 | Methylaspartate ammonia-lyase; Involved in the methylaspartate cycle. Catalyzes the formation of the alpha,beta-unsaturated bond by the reversible anti elimination of ammonia from L-threo-beta-methylaspartate (L-threo- (2S,3S)-3-methylaspartate) to give mesaconate (By similarity). | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Identified by similarity to SP:O35006; match to protein family HMM PF00977; match to protein family HMM TIGR00007. | 0.693 |
| CHY_0582 | mamA | CHY_0582 | CHY_0307 | Methylaspartate ammonia-lyase; Involved in the methylaspartate cycle. Catalyzes the formation of the alpha,beta-unsaturated bond by the reversible anti elimination of ammonia from L-threo-beta-methylaspartate (L-threo- (2S,3S)-3-methylaspartate) to give mesaconate (By similarity). | Methylaspartate mutase, S subunit; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate). | 0.979 |
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