STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHY_0619Molybdenum transport domain protein; Identified by similarity to GB:AAO82283.1; match to protein family HMM PF00126. (112 aa)    
Predicted Functional Partners:
CHY_0621
Molybdopterin-binding domain protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
   
 0.854
CHY_0620
Putative chromate transporter; Identified by match to protein family HMM PF02417.
       0.773
aroE
Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
       0.738
CHY_0622
Hydrolase, HAD subfamily IIIA; Identified by similarity to GB:AAP28271.1; match to protein family HMM TIGR01662; match to protein family HMM TIGR01668.
       0.736
CHY_0693
Conserved domain protein; Identified by similarity to GB:AAO82275.1.
 
     0.651
aroC
Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.
       0.577
CHY_0694
Conserved hypothetical protein; Identified by similarity to SP:Q46808; similarity to GB:AAN69811.1.
 
     0.525
CHY_0625
Conserved hypothetical protein; Identified by similarity to GB:AAM23385.1; Belongs to the sulfur carrier protein TusA family.
       0.478
CHY_0626
Putative membrane protein; Identified by similarity to GB:BAC15100.1; match to protein family HMM PF04143.
       0.441
hydB
Fe-hydrogenase, beta subunit; Identified by similarity to OMNI:TM1425; match to protein family HMM PF00037; match to protein family HMM PF01512.
       0.431
Your Current Organism:
Carboxydothermus hydrogenoformans
NCBI taxonomy Id: 246194
Other names: C. hydrogenoformans Z-2901, Carboxydothermus hydrogenoformans Z-2901, Carboxydothermus hydrogenoformans str. Z-2901
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