STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hgdC(R)-2-hydroxyglutaryl-CoA dehydratase activator; Identified by similarity to SP:P11568; match to protein family HMM PF01869; match to protein family HMM TIGR00241. (254 aa)    
Predicted Functional Partners:
CHY_1409
Conserved hypothetical protein; Identified by similarity to GB:AAM25019.1.
     0.971
CHY_1954
Conserved hypothetical protein; Identified by similarity to GB:AAM25019.1.
     0.970
hgdB
(R)-2-hydroxyglutaryl-CoA dehydratase, beta subunit; Identified by similarity to SP:P11570; match to protein family HMM PF06050.
  
 0.945
hgdA
(R)-2-hydroxyglutaryl-CoA dehydratase, alpha subunit; Identified by similarity to SP:P11569; match to protein family HMM PF06050.
 
  
 0.937
CHY_1953
Conserved hypothetical protein; Identified by similarity to GB:AAM25018.1.
   
 0.934
CHY_0487
Dehydratase family protein; Identified by similarity to SP:P11570; match to protein family HMM PF06050.
  
 0.901
CHY_1410
Conserved hypothetical protein; Identified by similarity to GB:AAM23610.1.
   
 0.867
CHY_1184
Putative (R)-2-hydroxyglutaryl-CoA dehydratase, alpha subunit; Identified by match to protein family HMM PF06050.
  
 0.816
fadD2
long-chain-fatty-acid--CoA ligase; Identified by similarity to SP:P94547; match to protein family HMM PF00501.
       0.708
CHY_0849
Hypothetical protein; Identified by Glimmer2; putative.
     
 0.605
Your Current Organism:
Carboxydothermus hydrogenoformans
NCBI taxonomy Id: 246194
Other names: C. hydrogenoformans Z-2901, Carboxydothermus hydrogenoformans Z-2901, Carboxydothermus hydrogenoformans str. Z-2901
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.