STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHY_0849Hypothetical protein; Identified by Glimmer2; putative. (39 aa)    
Predicted Functional Partners:
CHY_1609
3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase/isomerase family protein; Identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737.
  
 0.837
hydB
Fe-hydrogenase, beta subunit; Identified by similarity to OMNI:TM1425; match to protein family HMM PF00037; match to protein family HMM PF01512.
  
 0.683
hgdC
(R)-2-hydroxyglutaryl-CoA dehydratase activator; Identified by similarity to SP:P11568; match to protein family HMM PF01869; match to protein family HMM TIGR00241.
     
 0.605
fadD2
long-chain-fatty-acid--CoA ligase; Identified by similarity to SP:P94547; match to protein family HMM PF00501.
  
  
 0.603
hgdA
(R)-2-hydroxyglutaryl-CoA dehydratase, alpha subunit; Identified by similarity to SP:P11569; match to protein family HMM PF06050.
       0.557
hgdB
(R)-2-hydroxyglutaryl-CoA dehydratase, beta subunit; Identified by similarity to SP:P11570; match to protein family HMM PF06050.
       0.551
norV
Anaerobic nitric oxide reductase flavorubredoxin; Identified by similarity to SP:Q46877; match to protein family HMM PF00258; match to protein family HMM PF00753.
       0.540
crt1
3-hydroxybutyryl-CoA dehydratase; Identified by similarity to SP:P52046; match to protein family HMM PF00378; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.537
etfA1
Electron transfer flavoprotein, alpha subunit; Identified by similarity to SP:P94551; match to protein family HMM PF00766; match to protein family HMM PF01012.
  
 
 0.537
etfA2
Electron transfer flavoprotein, alpha subunit; Identified by match to protein family HMM PF00766; match to protein family HMM PF01012.
  
 
 0.537
Your Current Organism:
Carboxydothermus hydrogenoformans
NCBI taxonomy Id: 246194
Other names: C. hydrogenoformans Z-2901, Carboxydothermus hydrogenoformans Z-2901, Carboxydothermus hydrogenoformans str. Z-2901
Server load: low (20%) [HD]