STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
etfA2Electron transfer flavoprotein, alpha subunit; Identified by match to protein family HMM PF00766; match to protein family HMM PF01012. (318 aa)    
Predicted Functional Partners:
etfB2
Electron transfer flavoprotein, beta subunit; Identified by similarity to SP:P94550; match to protein family HMM PF01012.
 0.996
fixA
Electron transfer flavoprotein, beta subunit; Identified by similarity to SP:P53577; match to protein family HMM PF01012.
 0.995
etfB1
Electron transfer flavoprotein, beta subunit; Identified by match to protein family HMM PF01012.
 0.985
etfB3
Electron transfer flavoprotein, beta subunit; Identified by similarity to SP:P94550; match to protein family HMM PF01012.
 0.985
bcd2
butyryl-CoA dehydrogenase; Identified by similarity to SP:Q06319; match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028.
 
 
 0.907
fixX
Iron-sulfur cluster-binding protein FixX; Identified by similarity to GP:19881355.
  
 0.901
CHY_1732
acyl-CoA dehydrogenase; Identified by similarity to SP:P45867; match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028.
 
 
 0.879
bcd1
butyryl-CoA dehydrogenase; Identified by similarity to SP:Q06319; match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028.
 
 
 0.809
bcd3
butyryl-CoA dehydrogenase; Identified by similarity to SP:Q06319; match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028.
 
 
 0.790
CHY_1744
acyl-CoA dehydrogenase, short-chain specific; Identified by similarity to SP:P52042; match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028.
 
 
 0.752
Your Current Organism:
Carboxydothermus hydrogenoformans
NCBI taxonomy Id: 246194
Other names: C. hydrogenoformans Z-2901, Carboxydothermus hydrogenoformans Z-2901, Carboxydothermus hydrogenoformans str. Z-2901
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