STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHY_1596Conserved hypothetical protein; Identified by similarity to PIR:C96993. (69 aa)    
Predicted Functional Partners:
CHY_1598
Putative iron-sulfur-binding reductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF02754.
       0.713
CHY_1597
Identified by similarity to GB:AAP11049.1; match to protein family HMM PF00753.
       0.678
etfA3
Electron transfer flavoprotein, alpha subunit; Identified by similarity to SP:P94551; match to protein family HMM PF00766; match to protein family HMM PF01012.
  
    0.516
CHY_0587
Conserved hypothetical protein; Identified by similarity to GB:AAO36151.1; match to protein family HMM PF01814.
 
     0.488
etfB3
Electron transfer flavoprotein, beta subunit; Identified by similarity to SP:P94550; match to protein family HMM PF01012.
       0.479
crt2
3-hydroxybutyryl-CoA dehydratase; Identified by similarity to SP:P52046; match to protein family HMM PF00378; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.467
CHY_0940
Copper-translocating P-type ATPase; Identified by similarity to SP:O32220; match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR00003; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525.
     
 0.462
bcd3
butyryl-CoA dehydrogenase; Identified by similarity to SP:Q06319; match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028.
       0.443
CHY_0567
Glutaredoxin; Identified by similarity to SP:P37687; match to protein family HMM PF00462.
  
  
 0.414
hbd2
3-hydroxybutyryl-CoA dehydrogenase; Identified by similarity to SP:P52041; match to protein family HMM PF00725; match to protein family HMM PF02737.
  
    0.402
Your Current Organism:
Carboxydothermus hydrogenoformans
NCBI taxonomy Id: 246194
Other names: C. hydrogenoformans Z-2901, Carboxydothermus hydrogenoformans Z-2901, Carboxydothermus hydrogenoformans str. Z-2901
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.