STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHY_2081Molybdopterin oxidoreductase, iron-sulfur binding subunit; Identified by similarity to OMNI:AF0175; match to protein family HMM PF00037. (228 aa)    
Predicted Functional Partners:
CHY_2080
Putative molybdopterin oxidoreductase, membrane subunit; Identified by match to protein family HMM PF03916.
 
 0.998
ndrA
Probable respiratory nitrate reductase alpha subunit; Identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; match to protein family HMM TIGR01409; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.965
CHY_1853
Putative molybdopterin oxidoreductase, membrane subunit; Identified by similarity to OMNI:AF0500; match to protein family HMM PF03916.
 
 0.912
CHY_1640
Conserved hypothetical protein; Identified by similarity to GB:BAC51006.1.
     
  0.900
CHY_2574
Molybdopterin oxidoreductase, molybdopterin-binding subunit; Identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; match to protein family HMM TIGR01409; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.834
CHY_1852
Molybdopterin oxidoreductase, molybdopterin-binding subunit; Identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; match to protein family HMM TIGR01409; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.722
CHY_0476
Molybdopterin oxidoreductase, molybdopterin-binding subunit; Identified by match to protein family HMM PF00384; match to protein family HMM PF04879; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.698
cooF1
Iron-sulfur cluster-binding protein CooF; Identified by similarity to OMNI:AF0950; match to protein family HMM PF00037.
 
     0.627
CHY_1713
Iron-sulfur cluster-binding protein; Identified by match to protein family HMM PF00037.
  
     0.625
CHY_2083
Putative membrane protein; Identified by similarity to PIR:S77003.
       0.601
Your Current Organism:
Carboxydothermus hydrogenoformans
NCBI taxonomy Id: 246194
Other names: C. hydrogenoformans Z-2901, Carboxydothermus hydrogenoformans Z-2901, Carboxydothermus hydrogenoformans str. Z-2901
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