STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sfsASugar fermentation stimulation protein; Identified by similarity to SP:P18273; match to protein family HMM PF03749; match to protein family HMM TIGR00230; Belongs to the SfsA family. (229 aa)    
Predicted Functional Partners:
CHY_2088
Patatin family protein; Identified by similarity to PIR:E83228; match to protein family HMM PF01734.
       0.766
CHY_2089
Conserved hypothetical protein; Identified by similarity to PIR:T17189; match to protein family HMM PF03358.
       0.752
CHY_2086
Conserved hypothetical protein; Identified by similarity to PIR:H75399.
       0.592
proA
Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.
    
   0.579
CHY_2090
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01TT2019; match to protein family HMM PF02698.
       0.534
CHY_2085
Hypothetical protein; Identified by Glimmer2; putative.
       0.533
hisJ
Histidinol phosphatase; Identified by similarity to SP:O34411; match to protein family HMM PF02811; match to protein family HMM TIGR01856; Belongs to the PHP hydrolase family. HisK subfamily.
       0.519
CHY_2083
Putative membrane protein; Identified by similarity to PIR:S77003.
 
     0.449
prfA
Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
      
 0.405
Your Current Organism:
Carboxydothermus hydrogenoformans
NCBI taxonomy Id: 246194
Other names: C. hydrogenoformans Z-2901, Carboxydothermus hydrogenoformans Z-2901, Carboxydothermus hydrogenoformans str. Z-2901
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.