STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
crcB2Putative crcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. (134 aa)    
Predicted Functional Partners:
crcB
crcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.
 
     0.946
CHY_2102
Conserved hypothetical protein; Identified by similarity to GB:AAM07286.1; match to protein family HMM PF02641.
 
   
 0.934
CHY_2101
D-alanyl-D-alanine carboxypeptidase; Identified by similarity to SP:P38422; match to protein family HMM PF00768; match to protein family HMM PF07943; Belongs to the peptidase S11 family.
       0.563
CHY_2100
Putative membrane protein; Identified by similarity to PIR:E70306.
       0.497
CHY_2106
Conserved domain protein; Identified by similarity to OMNI:NTL01MM1452.
     
 0.459
fur
Ferric uptake regulation protein; Identified by similarity to SP:P54574; match to protein family HMM PF01475; Belongs to the Fur family.
     
 0.452
CHY_2105
Conserved hypothetical protein; Identified by similarity to GB:AAM25082.1; match to protein family HMM PF00350; match to protein family HMM PF01926.
       0.430
CHY_2097
Peptidase, homolog; Identified by similarity to GB:AAM24325.1.
       0.419
CHY_2098
Conserved hypothetical protein; Identified by similarity to PIR:C71037; match to protein family HMM PF03965.
       0.419
Your Current Organism:
Carboxydothermus hydrogenoformans
NCBI taxonomy Id: 246194
Other names: C. hydrogenoformans Z-2901, Carboxydothermus hydrogenoformans Z-2901, Carboxydothermus hydrogenoformans str. Z-2901
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.