STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHY_2585Glycosyl transferase, WecB/TagA/CpsF family; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid. (244 aa)    
Predicted Functional Partners:
CHY_1059
Bacterial sugar transferase family protein; Identified by match to protein family HMM PF02397.
    
 0.964
CHY_2586
Putative spore germination protein.
 
   
 0.923
tagO
Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase; Identified by similarity to SP:O34753; match to protein family HMM PF00953.
 
 
 
 0.916
CHY_2587
Identified by match to protein family HMM PF04464.
  
 
 0.829
CHY_2591
Putative transcriptional regulator; Identified by similarity to SP:Q02115; match to protein family HMM PF03816; match to protein family HMM TIGR00350.
 
   
 0.800
CHY_2584
Nucleotidyl transferase; Identified by match to protein family HMM PF00483.
       0.773
CHY_2583
Putative glycerol-1-phosphate dehydrogenase; Identified by similarity to SP:P72010; match to protein family HMM PF01761.
       0.762
CHY_2554
UDP-N-acetylglucosamine 2-epimerase; Identified by match to protein family HMM PF02350; match to protein family HMM TIGR00236; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
   
 0.699
galU
UTP-glucose-1-phosphate uridylyltransferase; Identified by match to protein family HMM PF00483; match to protein family HMM TIGR01099.
     
 0.672
CHY_2580
Identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880.
     
 0.594
Your Current Organism:
Carboxydothermus hydrogenoformans
NCBI taxonomy Id: 246194
Other names: C. hydrogenoformans Z-2901, Carboxydothermus hydrogenoformans Z-2901, Carboxydothermus hydrogenoformans str. Z-2901
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