STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK76212.1Antigen MTB48. (520 aa)    
Predicted Functional Partners:
ABK70889.1
Translation initiation factor IF-2 protein.
   
  
 0.831
ABK69833.1
Conserved hypothetical protein.
     
 0.825
ABK70287.1
Hypothetical protein; Identified by Glimmer2; putative.
      
 0.800
ABK72095.1
Hypothetical protein; Identified by Glimmer2; putative.
   
  
 0.774
espE
Hypothetical protein; Identified by Glimmer2; putative.
      
 0.768
ABK74495.1
Identified by match to protein family HMM PF01580.
      
 0.763
ABK74525.1
Conserved hypothetical protein.
      
 0.555
PE35
PE family protein; Part of the ESX-1 / type VII specialized secretion system (T7SS), which exports several proteins including EsxA and EsxB (Probable). Plays a role in DNA conjugation, in at least a donor strain.
   
  
 0.471
ABK73809.1
Conserved hypothetical protein.
       0.445
mycP1
Membrane-anchored mycosin mycp1; May play a dual role in regulation of ESX-1 secretion and virulence. Acts as a protease that cleaves EspB. Belongs to the peptidase S8 family.
  
  
 0.438
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.