Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ABK74968.1Chromosome condensation protein; Identified by match to protein family HMM PF02678; match to protein family HMM PF05726; Belongs to the pirin family. (324 aa)    
Predicted Functional Partners:
ABK72435.1
Identified by match to protein family HMM PF04264; Belongs to the UPF0312 family.
 
   
 0.855
ABK75904.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
      
 0.822
ABK70543.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
      
 0.822
ABK76147.1
DNA translocase FtsK; Identified by match to protein family HMM PF01580; Belongs to the FtsK/SpoIIIE/SftA family.
      
 0.767
ptsI
Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).
       0.615
ABK75926.1
Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; Identified by match to protein family HMM PF02900.
 
  
 0.601
whiB-2
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
  
  
 0.512
ABK70972.1
Glucitol operon repressor; Identified by match to protein family HMM PF00455; match to protein family HMM PF08220.
  
  
 0.456
ABK74819.1
1-phosphofructokinase; Identified by match to protein family HMM PF00294; Belongs to the carbohydrate kinase PfkB family.
     
 0.449
ABK70442.1
PTS system, Fru family protein, IIABC components; Identified by match to protein family HMM PF00359; match to protein family HMM PF02378; match to protein family HMM PF02379; match to protein family HMM TIGR00829; match to protein family HMM TIGR00848; match to protein family HMM TIGR01427.
       0.446
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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