ABK71320.1 protein (Mycolicibacterium smegmatis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ABK71320.1

Major facilitator family protein transporter; Identified by match to protein family HMM PF07690. (399 aa)

Predicted Functional Partners:

ABK69807.1

0.710

ABK73175.1

0.701

ABK72733.1

0.701

ABK74061.1

0.493

ABK74452.1

0.446

ABK74001.1

0.445

Your Current Organism:

Mycolicibacterium smegmatis

NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABK69807.1	ABK71320.1	MSMEG_0104	MSMEG_0103	Transcriptional regulator, LysR family protein; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family.	Major facilitator family protein transporter; Identified by match to protein family HMM PF07690.	0.710
ABK69807.1	ABK72733.1	MSMEG_0104	MSMEG_0102	Transcriptional regulator, LysR family protein; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family.	Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028.	0.595
ABK69807.1	ABK73175.1	MSMEG_0104	MSMEG_0100	Transcriptional regulator, LysR family protein; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family.	Phosphotyrosine protein phosphatase ptpb.	0.580
ABK69807.1	ABK74001.1	MSMEG_0104	MSMEG_0106	Transcriptional regulator, LysR family protein; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family.	Sensory histidine kinase; Identified by match to protein family HMM PF02518.	0.540
ABK69807.1	ABK74061.1	MSMEG_0104	MSMEG_0105	Transcriptional regulator, LysR family protein; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family.	DNA-binding response regulator, LuxR family protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196.	0.608
ABK71320.1	ABK69807.1	MSMEG_0103	MSMEG_0104	Major facilitator family protein transporter; Identified by match to protein family HMM PF07690.	Transcriptional regulator, LysR family protein; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family.	0.710
ABK71320.1	ABK72733.1	MSMEG_0103	MSMEG_0102	Major facilitator family protein transporter; Identified by match to protein family HMM PF07690.	Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028.	0.701
ABK71320.1	ABK73175.1	MSMEG_0103	MSMEG_0100	Major facilitator family protein transporter; Identified by match to protein family HMM PF07690.	Phosphotyrosine protein phosphatase ptpb.	0.701
ABK71320.1	ABK74001.1	MSMEG_0103	MSMEG_0106	Major facilitator family protein transporter; Identified by match to protein family HMM PF07690.	Sensory histidine kinase; Identified by match to protein family HMM PF02518.	0.445
ABK71320.1	ABK74061.1	MSMEG_0103	MSMEG_0105	Major facilitator family protein transporter; Identified by match to protein family HMM PF07690.	DNA-binding response regulator, LuxR family protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196.	0.493
ABK71320.1	ABK74452.1	MSMEG_0103	MSMEG_0924	Major facilitator family protein transporter; Identified by match to protein family HMM PF07690.	Identified by match to protein family HMM PF00795.	0.446
ABK72733.1	ABK69807.1	MSMEG_0102	MSMEG_0104	Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028.	Transcriptional regulator, LysR family protein; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family.	0.595
ABK72733.1	ABK71320.1	MSMEG_0102	MSMEG_0103	Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028.	Major facilitator family protein transporter; Identified by match to protein family HMM PF07690.	0.701
ABK72733.1	ABK73175.1	MSMEG_0102	MSMEG_0100	Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028.	Phosphotyrosine protein phosphatase ptpb.	0.818
ABK72733.1	ABK74001.1	MSMEG_0102	MSMEG_0106	Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028.	Sensory histidine kinase; Identified by match to protein family HMM PF02518.	0.410
ABK72733.1	ABK74061.1	MSMEG_0102	MSMEG_0105	Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028.	DNA-binding response regulator, LuxR family protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196.	0.431
ABK73175.1	ABK69807.1	MSMEG_0100	MSMEG_0104	Phosphotyrosine protein phosphatase ptpb.	Transcriptional regulator, LysR family protein; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family.	0.580
ABK73175.1	ABK71320.1	MSMEG_0100	MSMEG_0103	Phosphotyrosine protein phosphatase ptpb.	Major facilitator family protein transporter; Identified by match to protein family HMM PF07690.	0.701
ABK73175.1	ABK72733.1	MSMEG_0100	MSMEG_0102	Phosphotyrosine protein phosphatase ptpb.	Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028.	0.818
ABK73175.1	ABK74001.1	MSMEG_0100	MSMEG_0106	Phosphotyrosine protein phosphatase ptpb.	Sensory histidine kinase; Identified by match to protein family HMM PF02518.	0.421

page 1 of 2

Server load: low (26%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Co-occurrence

Textmining

Co-expression

© STRING Consortium 2026

Credits

Access

Info

About