ABK70240.1 protein (Mycolicibacterium smegmatis)

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second shell of interactors

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Score

ABK70240.1

Integral membrane protein; Identified by match to protein family HMM PF01970. (508 aa)

Predicted Functional Partners:

ABK69643.1

0.976

ABK70628.1

0.927

ABK72071.1

0.922

ABK76022.1

0.828

ABK71321.1

0.827

ABK71794.1

0.551

ABK70315.1

0.509

ABK72001.1

0.494

ABK74268.1

0.458

ABK71635.1

0.456

Your Current Organism:

Mycolicibacterium smegmatis

NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABK69643.1	ABK70240.1	MSMEG_0122	MSMEG_0125	Putative periplasmic solute-binding protein; Identified by match to protein family HMM PF03401.	Integral membrane protein; Identified by match to protein family HMM PF01970.	0.976
ABK69643.1	ABK70315.1	MSMEG_0122	MSMEG_4211	Putative periplasmic solute-binding protein; Identified by match to protein family HMM PF03401.	Two component system histidine kinase; Identified by match to protein family HMM PF02518.	0.547
ABK69643.1	ABK70628.1	MSMEG_0122	MSMEG_4209	Putative periplasmic solute-binding protein; Identified by match to protein family HMM PF03401.	Integral membrane protein.	0.903
ABK69643.1	ABK71321.1	MSMEG_0122	MSMEG_0123	Putative periplasmic solute-binding protein; Identified by match to protein family HMM PF03401.	Hypothetical protein; Identified by Glimmer2; putative.	0.941
ABK69643.1	ABK71635.1	MSMEG_0122	MSMEG_0121	Putative periplasmic solute-binding protein; Identified by match to protein family HMM PF03401.	Rhamnolipids biosynthesis 3-oxoacyl-[acyl-carrier-protein] reductase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370.	0.504
ABK69643.1	ABK71794.1	MSMEG_0122	MSMEG_4212	Putative periplasmic solute-binding protein; Identified by match to protein family HMM PF03401.	Transcriptional regulatory protein CitT; Identified by match to protein family HMM PF00072.	0.570
ABK69643.1	ABK72071.1	MSMEG_0122	MSMEG_4210	Putative periplasmic solute-binding protein; Identified by match to protein family HMM PF03401.	Identified by match to protein family HMM PF03401.	0.885
ABK69643.1	ABK74268.1	MSMEG_0122	MSMEG_0120	Putative periplasmic solute-binding protein; Identified by match to protein family HMM PF03401.	Probable transcriptional regulatory protein; Identified by match to protein family HMM PF00440.	0.492
ABK69643.1	ABK76022.1	MSMEG_0122	MSMEG_4208	Putative periplasmic solute-binding protein; Identified by match to protein family HMM PF03401.	Integral membrane protein; Identified by match to protein family HMM PF01970.	0.920
ABK70240.1	ABK69643.1	MSMEG_0125	MSMEG_0122	Integral membrane protein; Identified by match to protein family HMM PF01970.	Putative periplasmic solute-binding protein; Identified by match to protein family HMM PF03401.	0.976
ABK70240.1	ABK70315.1	MSMEG_0125	MSMEG_4211	Integral membrane protein; Identified by match to protein family HMM PF01970.	Two component system histidine kinase; Identified by match to protein family HMM PF02518.	0.509
ABK70240.1	ABK70628.1	MSMEG_0125	MSMEG_4209	Integral membrane protein; Identified by match to protein family HMM PF01970.	Integral membrane protein.	0.927
ABK70240.1	ABK71321.1	MSMEG_0125	MSMEG_0123	Integral membrane protein; Identified by match to protein family HMM PF01970.	Hypothetical protein; Identified by Glimmer2; putative.	0.827
ABK70240.1	ABK71635.1	MSMEG_0125	MSMEG_0121	Integral membrane protein; Identified by match to protein family HMM PF01970.	Rhamnolipids biosynthesis 3-oxoacyl-[acyl-carrier-protein] reductase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370.	0.456
ABK70240.1	ABK71794.1	MSMEG_0125	MSMEG_4212	Integral membrane protein; Identified by match to protein family HMM PF01970.	Transcriptional regulatory protein CitT; Identified by match to protein family HMM PF00072.	0.551
ABK70240.1	ABK72001.1	MSMEG_0125	MSMEG_0984	Integral membrane protein; Identified by match to protein family HMM PF01970.	Trap transporter, 4tm/12tm fusion protein; Identified by match to protein family HMM PF03600; match to protein family HMM PF06808; match to protein family HMM TIGR02123.	0.494
ABK70240.1	ABK72071.1	MSMEG_0125	MSMEG_4210	Integral membrane protein; Identified by match to protein family HMM PF01970.	Identified by match to protein family HMM PF03401.	0.922
ABK70240.1	ABK74268.1	MSMEG_0125	MSMEG_0120	Integral membrane protein; Identified by match to protein family HMM PF01970.	Probable transcriptional regulatory protein; Identified by match to protein family HMM PF00440.	0.458
ABK70240.1	ABK76022.1	MSMEG_0125	MSMEG_4208	Integral membrane protein; Identified by match to protein family HMM PF01970.	Integral membrane protein; Identified by match to protein family HMM PF01970.	0.828
ABK70315.1	ABK69643.1	MSMEG_4211	MSMEG_0122	Two component system histidine kinase; Identified by match to protein family HMM PF02518.	Putative periplasmic solute-binding protein; Identified by match to protein family HMM PF03401.	0.547