Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
ABK75452.1Similar to Streptomyces cyclase/dehydrase family protein; identified by match to protein family HMM PF03364. (144 aa)    
Predicted Functional Partners:
ABK70571.1
Conserved hypothetical protein.
  
   
 0.849
ABK74178.1
Conserved hypothetical protein.
      
 0.825
ABK72056.1
Thioesterase superfamily protein; Identified by match to protein family HMM PF03061.
  
    0.809
ABK73037.1
Putative conserved membrane protein.
  
     0.652
ABK71306.1
Conserved hypothetical protein.
  
   
 0.641
ABK71703.1
Putative conserved exported protein.
 
     0.640
ABK72741.1
Beta-lactamase; Identified by match to protein family HMM PF00144.
  
    0.602
ABK74136.1
Erp protein.
 
     0.586
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
     
 0.560
deoC-2
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
     
 0.560
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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