Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK72553.1Alpha-ketoglutarate-dependent taurine dioxygenase; Identified by match to protein family HMM PF02668. (312 aa)    
Predicted Functional Partners:
ABK74633.1
Extracellular solute-binding protein, family protein 3; Identified by match to protein family HMM PF04069.
 
 
 0.751
ABK72822.1
Epoxide hydrolase 1; Identified by match to protein family HMM PF00561; match to protein family HMM PF06441.
 
   
 0.728
ABK70193.1
Transferase; Identified by match to protein family HMM PF01019.
    
  0.724
ABK76062.1
Vanillate O-demethylase oxidoreductase; Identified by match to protein family HMM PF00111.
  
 
 0.710
ABK72768.1
ABC transporter component A.
 
 
 0.659
ABK71800.1
Putative HTH-type transcriptional regulator; Identified by match to protein family HMM PF00440.
  
  
 0.657
ABK71744.1
Alkanesulfonate monooxygenase; Identified by match to protein family HMM PF00296.
 
 
 0.619
ABK72349.1
ABC nitrate/sulfonate/bicarbonate family protein transporter, periplasmic ligand binding protein.
 
 
 0.607
ABK74926.1
Taurine transport system permease protein TauC; Identified by match to protein family HMM PF00528.
  
 
 0.606
ABK69800.1
Linear gramicidin synthetase subunit C; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF01370; match to protein family HMM PF07993; match to protein family HMM TIGR01720; match to protein family HMM TIGR01733; match to protein family HMM TIGR01746.
 
  
 0.583
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.