Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK70908.1Tetracenomycin polyketide synthesis hydroxylase TcmH; Identified by match to protein family HMM PF03992. (107 aa)    
Predicted Functional Partners:
ABK70103.1
Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801.
    
 0.946
ABK73191.1
MarR-family protein transcriptional regulator; Identified by match to protein family HMM PF01047; match to protein family HMM PF01978.
  
  
 0.617
ABK75772.1
Conserved hypothetical protein.
  
   
 0.544
ABK69963.1
C5-O-methyltransferase.
    
  0.544
ABK73204.1
Polyketide cyclase; Identified by match to protein family HMM PF04199.
 
  
  0.525
ABK74425.1
Conserved hypothetical protein.
 
     0.500
ABK70488.1
TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440.
  
     0.497
ABK71926.1
Conserved domain protein; Identified by match to protein family HMM PF02594; Belongs to the UPF0235 family.
 
     0.466
ABK76032.1
Conserved hypothetical protein.
 
     0.463
ABK72895.1
Salicylate esterase; Identified by match to protein family HMM PF00561.
 
     0.436
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: low (28%) [HD]