Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK73301.1Conserved hypothetical protein. (160 aa)    
Predicted Functional Partners:
ABK73105.1
Conserved hypothetical protein.
 
    0.966
ABK71473.1
O-methyltransferase MdmC; Identified by match to protein family HMM PF01135; match to protein family HMM PF01596.
       0.747
ABK75153.1
Conserved hypothetical protein.
  
     0.736
ABK70936.1
Conserved hypothetical protein.
  
     0.736
ABK73452.1
Conserved hypothetical protein.
  
     0.716
ABK74423.1
Monoglyceride lipase; Involved in the hydrolysis of exogenous host. Catalyzes the hydrolysis of long-chain monoacylglycerol. It hydrolyzes monoolein and monoacylglycerols (MAG) with fatty acid chains ranging from C14 to C18, but is unable to hydrolyze long-chain diacylglycerol (DAG).
       0.684
ABK74753.1
Secreted protein.
  
    0.672
ABK70482.1
LprC protein.
  
     0.672
ABK71457.1
Conserved hypothetical protein.
  
     0.655
ABK74560.1
acyl-ACP thioesterase superfamily protein; Identified by match to protein family HMM PF01643.
  
     0.654
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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