STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK69823.1Conserved hypothetical protein; Identified by match to protein family HMM PF02583. (101 aa)    
Predicted Functional Partners:
ABK71735.1
Conserved hypothetical protein; Identified by match to protein family HMM PF02583.
  
   
 0.617
ilvD
Dihydroxy-acid dehydratase; Identified by match to protein family HMM PF00920; match to protein family HMM TIGR00110; Belongs to the IlvD/Edd family.
       0.607
ABK72888.1
Conserved domain protein; Identified by match to protein family HMM PF00403.
 
  
 0.602
ABK71068.1
Copper-translocating P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525.
 
  
 0.520
ABK70013.1
Oxidoreductase, zinc-binding dehydrogenase family protein; Identified by match to protein family HMM PF00107.
  
  
 0.468
ABK69584.1
Alcohol dehydrogenase B; Identified by match to protein family HMM PF00107.
  
  
 0.468
ABK75278.1
Alcohol dehydrogenase 1; Identified by match to protein family HMM PF00107.
  
  
 0.468
ABK72362.1
Aryl-alcohol dehydrogenase; Identified by match to protein family HMM PF00107.
  
  
 0.468
ABK75122.1
S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; Identified by match to protein family HMM PF00107.
  
  
 0.468
ABK69703.1
Aryl-alcohol dehydrogenase; Identified by match to protein family HMM PF00107.
  
  
 0.468
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.