STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK70713.1Amidohydrolase 3; Identified by match to protein family HMM PF07969. (423 aa)    
Predicted Functional Partners:
ABK70258.1
Conserved hypothetical protein; Belongs to the CoA-transferase III family.
 
     0.948
ABK72357.1
Conserved hypothetical protein.
 
     0.781
ABK70316.1
Amidohydrolase 2; Identified by match to protein family HMM PF04909.
 
     0.743
ABK72866.1
Transmembrane transport protein; Identified by match to protein family HMM PF07690.
       0.733
ABK73240.1
Amidohydrolase 2; Identified by match to protein family HMM PF04909.
 
     0.731
ABK75292.1
P40 protein.
       0.721
ABK70468.1
Identified by match to protein family HMM PF04909.
 
     0.721
ABK71957.1
Identified by match to protein family HMM PF04909.
 
     0.719
ABK74782.1
Identified by match to protein family HMM PF04909.
 
     0.684
ABK74844.1
Conserved hypothetical protein; Identified by match to protein family HMM PF01796.
 
     0.674
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.