Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABK72866.1Transmembrane transport protein; Identified by match to protein family HMM PF07690. (372 aa)    
Predicted Functional Partners:
ABK70258.1
Conserved hypothetical protein; Belongs to the CoA-transferase III family.
       0.733
ABK70713.1
Amidohydrolase 3; Identified by match to protein family HMM PF07969.
       0.733
ABK75092.1
Arginine decarboxylase; Identified by match to protein family HMM PF01276; match to protein family HMM PF03711.
     
 0.667
ABK75292.1
P40 protein.
       0.616
ABK71523.1
DNA-binding protein.
     
 0.579
ABK70498.1
Trp region conserved hypothetical membrane protein; Identified by match to protein family HMM TIGR02234.
     
 0.534
ABK73103.1
Identified by match to protein family HMM PF00440; match to protein family HMM PF02909.
 
     0.477
ABK76042.1
Isochorismatase hydrolase; Identified by match to protein family HMM PF00857.
  
   
 0.468
saeA
Hypothetical protein; May be involved in assembly of the ESX-1 / type VII specialized secretion system (T7SS), which exports several proteins including EsxA and EsxB. Involved in DNA conjugation in recipient (MKD8) but not donor (mc(2)155) strain.
  
     0.458
saeC
Conserved hypothetical protein; May be involved in assembly of the ESX-1 / type VII specialized secretion system (T7SS), which exports several proteins including EsxA and EsxB. Involved in DNA conjugation in recipient (MKD8) strain.
  
     0.440
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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