Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABK75207.1Uracil DNA glycosylase superfamily protein; Identified by match to protein family HMM PF03167; match to protein family HMM TIGR00758. (209 aa)    
Predicted Functional Partners:
ABK75253.1
uracil-DNA glycosylase superfamily protein; Identified by match to protein family HMM PF03167.
  
  
  0.942
ABK70620.1
Endonuclease IV; Identified by match to protein family HMM PF01261; match to protein family HMM TIGR00587.
     
 0.834
ABK72752.1
Identified by match to protein family HMM PF01261.
     
 0.830
ABK69860.1
Identified by match to protein family HMM PF01261.
     
 0.830
ABK75113.1
Esterase; Identified by match to protein family HMM PF07859.
  
    0.555
ABK70019.1
Peptidase M22, glycoprotease; Identified by match to protein family HMM PF00814.
  
    0.541
ABK71227.1
Conserved hypothetical protein.
 
   0.527
ABK72581.1
Hypothetical protein; Identified by Glimmer2; putative.
  
   0.460
gpmA
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
  
    0.449
nadK
Inorganic polyphosphate/ATP-NAD kinase (Poly(P)/ATP NADkinase); Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
  
  
 0.448
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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