Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABK69722.1Aminoglycoside phosphotransferase; Identified by match to protein family HMM PF01636. (334 aa)    
Predicted Functional Partners:
ABK71438.1
3-oxoacyl-[acyl-carrier-protein] reductase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370.
 
     0.845
ABK72673.1
Putative aminotransferase; Identified by match to protein family HMM PF00202; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.842
ABK75166.1
Conserved hypothetical protein.
 
     0.835
ABK69839.1
Ethanolamine utilization protein EutN; Identified by match to protein family HMM PF03319.
 
     0.824
ABK72692.1
Identified by match to protein family HMM PF00936.
 
     0.795
ABK74854.1
Propanediol utilization protein PduA; Identified by match to protein family HMM PF00936.
       0.792
ABK74973.1
Aldehyde-alcohol dehydrogenase; Identified by match to protein family HMM PF00171.
 
     0.772
ABK72790.1
Amino acid permease; Identified by match to protein family HMM PF00324.
 
  
  0.748
ABK71758.1
Hypothetical protein; Identified by Glimmer2; putative.
       0.742
metH
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.740
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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