Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABK76071.1Amidohydrolase; Identified by match to protein family HMM PF01979; match to protein family HMM PF07969. (419 aa)    
Predicted Functional Partners:
ABK73660.1
Rieske [2Fe-2S] domain protein; Identified by match to protein family HMM PF00355.
 
  
 0.847
ABK74458.1
Conserved hypothetical protein.
  
    0.784
ABK70361.1
Transcriptional regulator, MarR family protein; Identified by match to protein family HMM PF01047.
 
     0.724
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
  
 
 0.707
hutH
Histidine ammonia-lyase; Identified by similarity to EGAD:14121; match to protein family HMM PF00221; match to protein family HMM TIGR01225.
  
  
 0.653
ABK71342.1
Rieske [2Fe-2S] domain protein; Identified by match to protein family HMM PF00355.
 
   
 0.647
ABK74307.1
Oxidoreductase, FAD-binding; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970.
     
 0.561
fabG
3-oxoacyl-(acyl-carrier-protein) reductase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370.
  
    0.534
ABK75785.1
Identified by match to protein family HMM PF02668.
 
    0.532
ABK71899.1
Amidohydrolase; Identified by match to protein family HMM PF01979; match to protein family HMM PF07969.
 
     0.528
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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