STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK70314.1FMN oxidoreductase; Identified by match to protein family HMM PF01613. (164 aa)    
Predicted Functional Partners:
ABK73366.1
Conserved hypothetical protein.
  
  
 0.850
ABK71847.1
Hypothetical protein; Identified by Glimmer2; putative.
  
  
 0.827
wrbA
NAD(P)H:quinone oxidoreductase, type IV; Identified by match to protein family HMM PF00258; match to protein family HMM PF03358; match to protein family HMM TIGR01755; Belongs to the WrbA family.
     
 0.759
ABK74396.1
Aldehyde dehydrogenase; Identified by match to protein family HMM PF00171.
  
  
 0.730
ABK75654.1
AMP-dependent synthetase and ligase; Identified by match to protein family HMM PF00501.
  
    0.681
ABK71426.1
Conserved hypothetical protein; Identified by match to protein family HMM TIGR02096.
  
    0.675
ABK70279.1
Conserved hypothetical protein; Identified by match to protein family HMM PF07366; match to protein family HMM TIGR02096.
  
    0.651
ABK73895.1
Biphenyl-2,3-diol 1,2-dioxygenase; Identified by match to protein family HMM PF00903.
  
  
 0.567
ABK74406.1
acyl-CoA dehydrogenase, short-chain specific, putative; Identified by match to protein family HMM PF08028.
  
  
 0.469
ABK72679.1
Toluate 1,2-dioxygenase electron transfer component; Identified by match to protein family HMM PF00106; match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970; match to protein family HMM PF07729; match to protein family HMM PF08021.
  
  
 0.459
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.