STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK75397.1Transcriptional regulator, LuxR family protein; Identified by match to protein family HMM PF00196; match to protein family HMM PF01590. (350 aa)    
Predicted Functional Partners:
ABK75795.1
Two-component system sensor kinase; Identified by match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM PF07730; match to protein family HMM TIGR00229.
 
 0.994
ABK71143.1
Two-component system sensor kinase; Identified by match to protein family HMM PF02518; match to protein family HMM PF07730; match to protein family HMM TIGR00229.
 
 0.969
ABK73884.1
Sensor histidine kinase; Identified by match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM PF07730.
 
 0.966
ABK69819.1
Two-component system sensor kinase; Identified by match to protein family HMM PF02518; match to protein family HMM PF07730.
 
 0.927
ABK73806.1
Transcriptional regulator, LuxR family protein; Identified by match to protein family HMM PF00196.
 
0.898
ABK73924.1
GAF family protein; Identified by match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM PF07730.
 
 0.888
ABK69658.1
Two-component sensor protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF05227.
    
 0.854
ABK74001.1
Sensory histidine kinase; Identified by match to protein family HMM PF02518.
 
 0.853
ABK73601.1
Putative two-component system sensor kinase; Identified by match to protein family HMM PF02518; match to protein family HMM PF07730.
 
 0.848
ABK71907.1
Putative cyclase; Identified by match to protein family HMM PF00211; match to protein family HMM PF00672.
  
 0.838
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.