ABK75809.1 protein (Mycolicibacterium smegmatis)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ABK75809.1

Conserved hypothetical protein. (181 aa)

Predicted Functional Partners:

ABK75309.1

0.933

ABK73028.1

0.921

ABK75111.1

0.899

ABK70883.1

0.896

ABK72335.1

0.887

ABK70545.1

0.875

ABK73810.1

0.826

ABK71990.1

0.816

ABK73113.1

0.786

ABK75355.1

0.756

Your Current Organism:

Mycolicibacterium smegmatis

NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABK70545.1	ABK70883.1	MSMEG_0349	MSMEG_0350	Virulence factor mce family protein; Identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996.	Virulence factor Mce family protein; Identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996.	0.973
ABK70545.1	ABK71990.1	MSMEG_0349	MSMEG_0347	Virulence factor mce family protein; Identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996.	Virulence factor Mce family protein; Identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996.	0.935
ABK70545.1	ABK72335.1	MSMEG_0349	MSMEG_0346	Virulence factor mce family protein; Identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996.	Virulence factor; Identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996.	0.963
ABK70545.1	ABK73028.1	MSMEG_0349	MSMEG_0348	Virulence factor mce family protein; Identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996.	Mce-family protein mce3c; Identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996.	0.928
ABK70545.1	ABK73113.1	MSMEG_0349	MSMEG_0355	Virulence factor mce family protein; Identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996.	Conserved hypothetical protein.	0.547
ABK70545.1	ABK73810.1	MSMEG_0349	MSMEG_0354	Virulence factor mce family protein; Identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996.	Conserved hypothetical protein; Identified by match to protein family HMM PF05305.	0.611
ABK70545.1	ABK75111.1	MSMEG_0349	MSMEG_0352	Virulence factor mce family protein; Identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996.	Conserved hypothetical protein.	0.941
ABK70545.1	ABK75309.1	MSMEG_0349	MSMEG_0351	Virulence factor mce family protein; Identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996.	Virulence factor mce family protein; Identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996.	0.979
ABK70545.1	ABK75355.1	MSMEG_0349	MSMEG_5208	Virulence factor mce family protein; Identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996.	Conserved hypothetical protein.	0.718
ABK70545.1	ABK75809.1	MSMEG_0349	MSMEG_0353	Virulence factor mce family protein; Identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996.	Conserved hypothetical protein.	0.875
ABK70883.1	ABK70545.1	MSMEG_0350	MSMEG_0349	Virulence factor Mce family protein; Identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996.	Virulence factor mce family protein; Identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996.	0.973
ABK70883.1	ABK71990.1	MSMEG_0350	MSMEG_0347	Virulence factor Mce family protein; Identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996.	Virulence factor Mce family protein; Identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996.	0.917
ABK70883.1	ABK72335.1	MSMEG_0350	MSMEG_0346	Virulence factor Mce family protein; Identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996.	Virulence factor; Identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996.	0.950
ABK70883.1	ABK73028.1	MSMEG_0350	MSMEG_0348	Virulence factor Mce family protein; Identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996.	Mce-family protein mce3c; Identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996.	0.978
ABK70883.1	ABK73113.1	MSMEG_0350	MSMEG_0355	Virulence factor Mce family protein; Identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996.	Conserved hypothetical protein.	0.563
ABK70883.1	ABK73810.1	MSMEG_0350	MSMEG_0354	Virulence factor Mce family protein; Identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996.	Conserved hypothetical protein; Identified by match to protein family HMM PF05305.	0.728
ABK70883.1	ABK75111.1	MSMEG_0350	MSMEG_0352	Virulence factor Mce family protein; Identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996.	Conserved hypothetical protein.	0.941
ABK70883.1	ABK75309.1	MSMEG_0350	MSMEG_0351	Virulence factor Mce family protein; Identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996.	Virulence factor mce family protein; Identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996.	0.973
ABK70883.1	ABK75355.1	MSMEG_0350	MSMEG_5208	Virulence factor Mce family protein; Identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996.	Conserved hypothetical protein.	0.747
ABK70883.1	ABK75809.1	MSMEG_0350	MSMEG_0353	Virulence factor Mce family protein; Identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996.	Conserved hypothetical protein.	0.896