Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
nthANitrile hydratase, alpha subunit; Identified by match to protein family HMM PF02979; match to protein family HMM TIGR01323. (206 aa)    
Predicted Functional Partners:
ABK72826.1
Nitrile hydratase.
 
 
 0.999
ABK75044.1
Amidase; Identified by match to protein family HMM PF01425; Belongs to the amidase family.
    
 0.967
ABK72107.1
Amidase; Identified by match to protein family HMM PF01425; Belongs to the amidase family.
    
 0.967
ABK69566.1
Nitrile hydratase activator P14k.
 
  
 0.951
ABK72052.1
glutamyl-tRNA(Gln) amidotransferase subunit A; Identified by match to protein family HMM PF01425; Belongs to the amidase family.
    
 0.935
ABK70548.1
Amidase; Identified by match to protein family HMM PF01425; Belongs to the amidase family.
 
  
 0.864
ABK71083.1
Amidase; Identified by match to protein family HMM PF01425; Belongs to the amidase family.
    
 0.852
ABK70372.1
6-aminohexanoate-cyclic-dimer hydrolase; Identified by match to protein family HMM PF01425.
    
 0.749
ABK69621.1
6-aminohexanoate-cyclic-dimer hydrolase; Identified by match to protein family HMM PF01425; Belongs to the amidase family.
    
 0.749
gatA
glutamyl-tRNA(Gln)/aspartyl-tRNA(Asn) amidotransferase, A subunit; Identified by match to protein family HMM PF01425; Belongs to the amidase family.
    
 0.717
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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