Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK75135.1Hypothetical protein; Identified by Glimmer2; putative. (132 aa)    
Predicted Functional Partners:
ABK73728.1
5'-nucleotidase; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01549.
      
 0.715
ABK74595.1
Flavoprotein; Identified by match to protein family HMM PF01565; match to protein family HMM PF02913.
      
 0.715
ABK72527.1
Dehydrogenase/reductase SDR family protein member 4; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370.
      
 0.606
ABK72801.1
GTP cyclohydrolase.
      
 0.588
ABK76200.1
Bacterial type II secretion system protein F domain; Identified by match to protein family HMM PF00482.
      
 0.588
ABK71826.1
IS1096, tnpA protein; Identified by similarity to GP:150005; match to protein family HMM PF01610.
       0.572
crcB
CrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.
      
 0.549
crcB-2
Putative CrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.
      
 0.549
ABK69907.1
Conserved hypothetical protein, putative; Identified by match to protein family HMM PF02641.
      
 0.545
ABK70872.1
palmitoyl-CoA hydrolase; Identified by match to protein family HMM PF02551.
      
 0.422
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.