Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ABK73804.1Secreted protein, putative; Identified by match to protein family HMM PF01522. (500 aa)    
Predicted Functional Partners:
ABK71469.1
Chitin synthase; Identified by match to protein family HMM PF00535; match to protein family HMM PF03142.
 
  
 0.833
ABK72163.1
Nucleotide-sugar dehydrogenase; Identified by match to protein family HMM PF00984; match to protein family HMM PF03720; match to protein family HMM PF03721; match to protein family HMM TIGR03026; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
    0.751
ABK69674.1
Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Identified by match to protein family HMM PF00310; match to protein family HMM PF01380.
     
 0.554
aftD
Conserved hypothetical protein; Involved in the biosynthesis of the arabinogalactan (AG) region of the mycolylarabinogalactan-peptidoglycan (mAGP) complex, an essential component of the mycobacterial cell wall. Catalyzes the addition of an arabinofuranosyl (Araf) residue from the sugar donor decaprenyl-phospho-arabinose (DPA) on the C-3 of an alpha-(1->5)-linked Araf from the arabinan backbone of AG.
  
 
 0.483
ABK71325.1
Glycosyl transferase, family protein 39; Identified by match to protein family HMM PF02366.
  
 
 0.483
ABK73894.1
Conserved hypothetical protein.
  
 
 0.483
ABK73375.1
Conserved hypothetical protein.
  
 
 0.483
ABK71228.1
Glycosyl transferase, family protein 39; Identified by match to protein family HMM PF02366.
  
 
 0.483
ABK69843.1
Integral membrane protein; Identified by match to protein family HMM PF02366.
  
 
 0.483
ABK75671.1
Probable conserved transmembrane protein.
  
 
 0.462
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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