Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK72195.1Glycerol dehydratase large subunit; Identified by match to protein family HMM PF02286. (754 aa)    
Predicted Functional Partners:
ABK70278.1
Coenzyme B12-dependent glycerol dehydrogenase small subunit.
 
 0.988
ABK74269.1
Coenzyme B12-dependent glycerol dehydrogenase small subunit; Identified by match to protein family HMM PF02287.
 
 0.953
ABK71644.1
Diol dehydrase gamma subunit.
 
 0.943
ABK69789.1
Propanediol utilization: dehydratase, medium subunit; Identified by match to protein family HMM PF02288.
 
0.917
ABK75675.1
Putative diol dehydratase reactivation protein.
 
  
 0.855
ABK74550.1
PduH protein.
 
  
 0.823
ABK74671.1
Conserved hypothetical protein; Identified by match to protein family HMM PF03928.
 
  
 0.795
ABK75170.1
PduO protein; Identified by match to protein family HMM PF03928.
 
  
 0.793
ABK74854.1
Propanediol utilization protein PduA; Identified by match to protein family HMM PF00936.
 
  
 0.722
ABK74973.1
Aldehyde-alcohol dehydrogenase; Identified by match to protein family HMM PF00171.
 
  
 0.560
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.