STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72812.1DeoR-family protein transcriptional regulator; Identified by match to protein family HMM PF00455; match to protein family HMM PF08220. (258 aa)    
Predicted Functional Partners:
ABK70442.1
PTS system, Fru family protein, IIABC components; Identified by match to protein family HMM PF00359; match to protein family HMM PF02378; match to protein family HMM PF02379; match to protein family HMM TIGR00829; match to protein family HMM TIGR00848; match to protein family HMM TIGR01427.
 
  
 0.916
ABK69877.1
Glucosidase; Identified by match to protein family HMM PF02056.
 
    0.846
ABK70672.1
Glucosamine-6-phosphate deaminase 1; Identified by match to protein family HMM PF01182.
 
  
 0.824
ABK72535.1
1-phosphofructokinase; Identified by match to protein family HMM PF00294; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.817
ABK74819.1
1-phosphofructokinase; Identified by match to protein family HMM PF00294; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.805
ABK71658.1
6-phosphofructokinase isozyme 2; Identified by match to protein family HMM PF00294; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.750
ABK70962.1
Probable sugar ABC transporter, substrate-binding protein, putative; Identified by match to protein family HMM PF01547.
 
  
 0.653
ABK71892.1
Carbohydrate kinase; Identified by match to protein family HMM PF00294; Belongs to the carbohydrate kinase PfkB family.
  
  
 0.614
ABK70632.1
Glycerol-3-phosphate dehydrogenase 1; Identified by match to protein family HMM PF01266; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
  
 0.569
ABK74801.1
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
  
 0.540
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.