Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ABK75808.1D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit; Identified by match to protein family HMM PF08013; match to protein family HMM TIGR02810. (440 aa)    
Predicted Functional Partners:
ABK74800.1
Putative sugar isomerase, AgaS family protein; Identified by match to protein family HMM PF01380.
 
 
 0.959
eda
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; Identified by similarity to SP:P10177; match to protein family HMM PF01081; match to protein family HMM TIGR01182.
  
  
  0.915
ABK71629.1
2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Identified by match to protein family HMM PF01081.
  
 
  0.870
ABK70986.1
Identified by match to protein family HMM PF01869.
 
    0.824
ABK71934.1
Integral membrane protein; Identified by match to protein family HMM PF00892.
 
    0.810
ABK70975.1
Alpha-galactosidase; Identified by match to protein family HMM PF02056.
 
     0.764
ABK73511.1
Tagatose-1,6-bisphosphate aldolase GatY; Identified by match to protein family HMM PF01116.
  
 
 0.759
ABK74819.1
1-phosphofructokinase; Identified by match to protein family HMM PF00294; Belongs to the carbohydrate kinase PfkB family.
     
 0.660
ABK72535.1
1-phosphofructokinase; Identified by match to protein family HMM PF00294; Belongs to the carbohydrate kinase PfkB family.
     
 0.660
ABK71658.1
6-phosphofructokinase isozyme 2; Identified by match to protein family HMM PF00294; Belongs to the carbohydrate kinase PfkB family.
     
 0.660
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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